Oryza sativa japonica (Japanese rice) (RAPDB): Os02g0102900
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Entry
Os02g0102900 CDS
T02163
Name
(GenBank) Similar to RuBisCO subunit binding-protein beta subunit, chloroplast (60 kDa chaperonin beta subunit) (CPN-60 beta) (Fragment)
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Os02g0102900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dosa03019
]
Os02g0102900
03110 Chaperones and folding catalysts [BR:
dosa03110
]
Os02g0102900
03029 Mitochondrial biogenesis [BR:
dosa03029
]
Os02g0102900
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dosa04147
]
Os02g0102900
Enzymes [BR:
dosa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Os02g0102900
Messenger RNA biogenesis [BR:
dosa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Os02g0102900
Chaperones and folding catalysts [BR:
dosa03110
]
Heat shock proteins
HSP60 / Chaperonin
Os02g0102900
Mitochondrial biogenesis [BR:
dosa03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Os02g0102900
Exosome [BR:
dosa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Os02g0102900
Exosomal proteins of other body fluids (saliva and urine)
Os02g0102900
Exosomal proteins of breast cancer cells
Os02g0102900
Exosomal proteins of colorectal cancer cells
Os02g0102900
Exosomal proteins of bladder cancer cells
Os02g0102900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
YIEGIA_cap
Motif
Other DBs
NCBI-ProteinID:
BAF07515
RAP-DB:
Os02g0102900
UniProt:
B9F1P3
LinkDB
All DBs
Position
2
Genome browser
AA seq
598 aa
AA seq
DB search
MASAFGSTSACGIKITPTAFATKKHLCLVPPPVVSLPRKNRPQRKCNFRVNAAKELYFNK
DGLAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVEN
IGAKLVRQAAAKTNDLAGDGTTTSVVLAQGMITEGVKVVAAGANPVQITRGIEKTAKALV
SELQKMSKEVEDSELADVAAVSAGNNYEIGNMIAEAMNKVGRQGVVTLEEGKSAENNLYV
VEGMQFDRGYISPYFVTDSEKMSVEYENCKLLLVDKKINNARDLITILEDAIRGGYPILI
VTEDIEQEALATLVVNRLRGALKIAAIKAPGFGERKSQYLDDIATLTGGTVIREEVGLSL
DKADRDVLGTAAKVVVTKDSTTIVGDGTTQDEVNKRVTQIKNQIEVAEQEYEKEKLNERI
AKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAI
IETLENDEQKVGAEIVRKSLSYPLKLIAKNAGVNGSVVTEKVLANDNFRYGYNAATGKYE
DLMAAGIIDPTKVVRCCLEHAASVAKTFITSDAVVVDIKEPEKAAAAGNPMGGSGFGF
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagcattcgggagcacctcagcatgtggcatcaagatcactcctaccgctttt
gccaccaagaaacatctttgcctggttccacccccagtcgtttcacttccccggaaaaat
aggcctcagaggaagtgtaatttcagagtaaatgctgccaaagagttatatttcaacaag
gatgggttggctatcaagaagctgcaaaatggagtcaataagcttgctgatctcgttgga
gtcacccttggtccaaaaggacggaatgttgtccttgagagcaagtatggatcacctaaa
attgtcaatgatggtgttaccgttgcaaaggaggttgagctggaggaccctgttgaaaat
attggagccaaattagtccggcaagctgcagccaagacaaatgatttggctggtgatggg
acaacgacttctgttgtccttgctcaagggatgatcacagagggtgttaaggttgtggct
gctggtgctaatccagtacagattacccgtggtatagagaaaacggccaaagcacttgtg
agtgaactccaaaaaatgtccaaggaggttgaagacagcgaacttgctgatgttgctgcg
gtaagtgctggaaataactacgaaattggcaacatgatagctgaagctatgaacaaggtt
ggacgacagggggtggtcacacttgaagaaggaaagagtgctgaaaataatctctatgtt
gttgagggaatgcaatttgatcgcggctatatttctccctactttgtaactgacagtgaa
aaaatgtcagtggagtatgagaattgcaagttgctccttgtggacaagaaaatcaacaat
gccagagatcttataacaattctggaggatgctattaggggtgggtacccaatcctaata
gttacggaggatattgagcaggaagctcttgcaactcttgtggtcaacaggcttaggggt
gcattgaagattgctgctattaaagctcctggttttggagaacgcaagagtcaatacctt
gatgatattgctactcttactggaggtactgtcatcagggaagaagttggcttgtcccta
gacaaagctgatagagatgttctaggaacggccgccaaggttgtagttaccaaggattca
acaacaatagttggggatggtactacccaggacgaagtaaacaaaagggtgacacaaatc
aagaaccagattgaggttgctgaacaggaatatgagaaagaaaaactgaatgagagaata
gctaagctctctggtggtgttgctgtcatccaggtaggagcacagacagaaactgagctt
aaggaaaagaaactgagggttgaagatgcactgaatgcaaccaaggcggctgttgaggaa
ggtattgttgttggaggtggctgtacgcttttgcggcttgcatcaaaagttgatgccatt
atagaaacacttgagaatgatgaacagaaggttggggctgaaatcgtaaggaagtccttg
agttacccacttaaattaatagcaaaaaatgctggtgttaacggcagtgttgttactgag
aaggtccttgccaatgataacttcaggtatggttacaatgccgctacaggaaaatatgag
gatttgatggctgctggtattattgatcccaccaaggtggtgagatgttgcttggagcat
gctgcgtcggtggcgaaaacattcatcacatcagatgctgttgtggtggacatcaaggag
cctgagaaagcagctgctgctgggaacccaatgggtggatcaggttttggattttag
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