Oryza sativa japonica (Japanese rice) (RAPDB): Os02g0116000
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Entry
Os02g0116000 CDS
T02163
Name
(GenBank) The start codon is not identified.; Zinc finger, C2H2-type domain containing protein
KO
K09191
general transcription factor IIIA
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dosa03000
]
Os02g0116000
03021 Transcription machinery [BR:
dosa03021
]
Os02g0116000
Transcription factors [BR:
dosa03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
Os02g0116000
Transcription machinery [BR:
dosa03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
Os02g0116000
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
Zap1_zf1
zf-H2C2_5
zf_C2H2-Disco
DUF7565
zf_C2H2_ZNF292
FOXP-CC
DUF8760
zf-H2C2_2
zf-C2H2_8
Motif
Other DBs
NCBI-ProteinID:
BAF07590
RAP-DB:
Os02g0116000
UniProt:
Q0E4J8
LinkDB
All DBs
Position
2
Genome browser
AA seq
284 aa
AA seq
DB search
RSFICPLEDCPFSYIRKDHLNRHMLKHQGKLFTCSMDGCGRKFSIKANMQRHVKEIHEDE
TATKSNRQFVCKEEGCNKVFKYASKMKKHEESHVKLDYVEVVCCEPGCMKTFTNVECLRA
HNQACHQYVQCDICGEKHLKKNIKRHLRAHEEVPSTERIKCSFEGCECSFSNKSNLTKHI
KASHDQVKPFACRFTGCEKVFPYKHVRDNHEKSSAHVYTQANFTEMDEQLLSCPRGGRKR
KAVTVETLTRKRVTMHGDASSLDNGTEYLRWLLSGGDDDSSQTH
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
agatcgttcatttgcccacttgaagactgccctttcagctacattaggaaagatcacttg
aaccgtcatatgcttaagcatcaagggaagttgtttacctgctctatggatggttgtggt
aggaagttcagtataaaggcaaatatgcaaaggcatgtaaaggaaatccatgaggatgaa
actgctactaaaagcaaccggcagtttgtttgcaaggaggagggctgtaacaaggttttc
aagtatgcttcaaagatgaagaaacatgaagaatcacatgtgaaattggactacgtggaa
gtagtctgctgtgaaccaggctgcatgaagacattcacaaatgttgaatgtttgagggct
cataatcaggcttgccatcaatatgttcagtgtgatatctgtggggaaaaacacctgaag
aagaacattaaaaggcacctacgagcccatgaggaggtgccatctactgaaaggataaaa
tgcagttttgagggctgtgaatgctctttttccaataaatcaaatttaaccaaacatata
aaggcgtcccatgatcaagtaaaacctttcgcatgtcgattcacggggtgtgaaaaggtg
tttccatacaagcatgtcagggacaaccatgagaaatccagcgctcatgtatacactcag
gcaaacttcacggagatggacgagcagttactctcgtgtccgagaggtggacggaagagg
aaagctgtgactgtcgaaactcttacgcgcaagagggtgaccatgcacggcgacgcttcg
tcgttggacaatggaactgagtacctgcgctggttgctttctggtggggatgatgattcg
agccaaactcattag
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