Oryza sativa japonica (Japanese rice) (RAPDB): Os02g0177500
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Entry
Os02g0177500 CDS
T02163
Name
(GenBank) Similar to Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF)
KO
K11098
small nuclear ribonucleoprotein F
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Os02g0177500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dosa03019
]
Os02g0177500
03041 Spliceosome [BR:
dosa03041
]
Os02g0177500
03032 DNA replication proteins [BR:
dosa03032
]
Os02g0177500
Messenger RNA biogenesis [BR:
dosa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
Os02g0177500
Spliceosome [BR:
dosa03041
]
Complex A
U1 snRNP components
Sm proteins
Os02g0177500
U2 snRNP components
Os02g0177500
Complex B
U1 snRNP components
Os02g0177500
U4/U6.U5 tri-snRNP components
Os02g0177500
Complex C
U2 snRNP components
Os02g0177500
DNA replication proteins [BR:
dosa03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
Os02g0177500
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-ProteinID:
BAF07982
RAP-DB:
Os02g0177500
UniProt:
A0A0P0VFH8
LinkDB
All DBs
Position
2
Genome browser
AA seq
86 aa
AA seq
DB search
MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNL
GEILIRCNNVLYLRGVPEDTEIEDAE
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgtgccagttaacccgaagcctttcttgaacaacctgacagggaagcctgtc
attgtcaaacttaagtggggtatggaatacaaaggatatcttgtttctgtcgactcttat
atgaatctgcagctggctaatacagaggagtatattgatgggcaattctctggaaacttg
ggtgagatactgataaggtgcaacaacgttttgtatctccgaggcgttccagaggatacc
gagatagaggatgcggaatga
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