Oryza sativa japonica (Japanese rice) (RAPDB): Os02g0214900
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Entry
Os02g0214900 CDS
T02163
Name
(GenBank) Similar to Histone deacetylase
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03082
ATP-dependent chromatin remodeling
dosa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
Os02g0214900
03083 Polycomb repressive complex
Os02g0214900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dosa03036
]
Os02g0214900
Enzymes [BR:
dosa01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
Os02g0214900
Chromosome and associated proteins [BR:
dosa03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
Os02g0214900
HDAC complexes
Sin3A-HDAC complex
Os02g0214900
BRAF-HDAC complex
Os02g0214900
REST complex
Os02g0214900
SHIP complex
Os02g0214900
MiDAC complex
Os02g0214900
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
Os02g0214900
Heterochromatin formation proteins
Other heterochromatin formation proteins
Os02g0214900
Chromatin remodeling factors
NuRD complex
Os02g0214900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-ProteinID:
BAF08198
RAP-DB:
Os02g0214900
UniProt:
Q7Y0Y6
LinkDB
All DBs
Position
2
Genome browser
AA seq
510 aa
AA seq
DB search
MDPSSAGAGGNSLASASCGDAQKRRVCYFYDPEVGNYYYGQGHPMKPHRVRMTHALLAHY
GLLAPAKMEVLRPLPARGIDLCRFHSDDYVAFLRAVTPETQLGQVRALRRFNIGPDCPVF
DGLYAYCQTYAGASVGAAVKLNHGTHDIAINWSGGLHHAKKSEASGFCYVNDIVLAILEL
LKLHERVLYIDIDIHHGDGVEEAFYTTNRVMTVSFHKFGDYFPGTGDIRDIGYSEGKYYC
LNVPLDDGIDDDSYQSIFKPIISKVMEMYRPGAVVLQCGADSLSGDRLGCFNLSGKGHAE
CVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGEELQEKLPYNEYYEYFGPEYSL
YVAASNMENRNTNKQLEEIKCNILDNLSKLQHAPSVQFQERIPETKLPEPDEDQEDPDER
HDPDSDMVLDDHKPTGHSARSLIHNIGVKREITETETKDQHGKRLTTEHKGPEPMAEDLG
SSKQAPTADANAVAVNAPGNARNEPGSSPK
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggacccctcgtcggcgggcgcgggcggcaactcgctggcgtcggcgtcgtgcggcgac
gcgcagaagcggcgggtgtgctacttctacgacccggaggtgggcaactactactacggt
cagggccacccgatgaagccccaccgggtgaggatgacccacgcgctgctcgcccactac
ggcctcctcgccccggccaagatggaggtgctccgcccgctccccgcccgcggcatcgac
ctctgccgcttccactccgacgactacgtcgccttcctccgcgccgtcaccccggagacc
cagctcggccaggtccgcgccctccgccgcttcaacatcggcccggactgccccgtcttc
gacggcctctacgcctactgccagacctacgcgggggcctccgtcggcgccgccgtcaag
ctcaaccacggcacccacgacatcgccatcaactggtccggcgggttgcaccacgccaag
aagtccgaggcctccggcttctgctacgtcaacgacatcgtcctcgccatcctcgagctc
ctcaagctccatgagcgagttctgtatattgatattgatatccatcatggagatggagtt
gaggaggcattctacacaacaaacagggttatgacagtctcatttcacaagtttggggat
tatttcccgggaacaggggatatccgcgacattgggtattcagaagggaagtattactgc
ctgaatgtcccgctggatgatggaattgatgatgacagctaccagtccatcttcaagccg
atcatcagcaaagtcatggagatgtatcgtcctggtgcagtcgtgcttcagtgcggcgct
gattcgttgtccggtgataggttgggctgtttcaatctctcagggaaaggtcatgctgaa
tgtgttaagttcatgaggtctttcaatgttccgttgcttcttcttggtggtggtggatat
accataagaaatgttgcacgctgctggtgttacgagacaggagttgcacttggtgaagag
ctacaggagaagttgccttacaatgagtattatgaatattttggtccagaatacagtctt
tacgttgcagcaagtaacatggagaacagaaatacaaacaagcaactggaggaaataaaa
tgcaatattctggacaatctttcaaaacttcaacatgcacctagcgtccaatttcaagag
cgaattcctgaaacaaagctacctgagccagatgaagatcaagaggatccagatgaaagg
cacgaccctgactctgatatggtgttggatgatcacaaacctacgggacactcagcaaga
agccttattcacaacatcggagtaaagagagaaattactgaaacagagaccaaagatcag
catggtaagagattaacaaccgaacataaaggaccagaaccgatggcagaggatcttggt
tcctccaagcaagctcctactgcggatgcaaatgcggtggccgtcaacgcgccaggcaac
gccaggaatgaaccgggaagctcacccaaatga
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