KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os02g0245000
Entry
Os02g0245000      CDS       T02163                                 
Name
(GenBank) SWAP/Surp domain containing protein
  KO
K12825  splicing factor 3A subunit 1
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Os02g0245000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dosa03041]
    Os02g0245000
Spliceosome [BR:dosa03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    Os02g0245000
 Complex B
    Os02g0245000
 Complex C
   U2 SnRNP specific factors
    Os02g0245000
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin
Other DBs
NCBI-ProteinID: BAF08332
RAP-DB: Os02g0245000
UniProt: A3A505
LinkDB
Position
2
AA seq 792 aa
MGAAILPLPAPDGDGDSHPQQPPPPPPGGGAKPEPPPTVATHTRPLGIIHPPPDIRVIIE
KTATFVSKNGPEFERRIISHNAGNAKFNFLQPSDPYHAYYQHRVSELAAAPPSAAASAAD
AAPEPDESGAAPPPADSAAAPTVDGEAAKADHSAPFRVPPPTKVLVPPKAELYTVHLPEG
ITGEELDIIKLTAQFVARNGKSFLTSLAQRESTNPQFHFIRPTHSMFTFFTKLTDTYSRV
LNPVEGMPALLKDLQDGAKDLTTVLERCLNRLEWDRSQEQARQQAEDEIEQERMQMQMID
WHDFVVVETIEFADDECEGLPVPLTLEELKRRKRIEDLGEEEAAMELAEPAKDVEMEMDE
EEIQLVEEGMRAARLEENEGGVQVKLAGDEEPPMRIVKNYKRPEERIPAERDPTKFVVSP
ITGELIPISEMEEHMRISLIDPKYKEQKERMLAKIKETTLAPDDEISRNIVGLARTRPDI
FGTTEEEVSNAVKAEIEKKKDEQPKQVIWDGHSGSIGRTATQALSMGGEEQVDASNVPGP
APLPRPPMPLLRPPQPLPLVNVPRFQPSAMPYPPHQQPHLMQGVPHMMPTMHPPPPPPIP
GQPQVIRMPGSMGPMPTNIPPPPPGQNPYMPGPPRPYSMPPPPHMPTMATMVNPIGIPQP
PPPLPPQPPAEEQPPQPDEPEPKRLRTDDASLIPAEQFLAQHPGPAHISVSVPNLDEGNL
RGQVLEIGVQSLSDTVGSLKEQIAGELQLPANKQKLSVRTSFLKDNLTLAYYNIGPGVVI
NLTLRERGGRKK
NT seq 2379 nt   +upstreamnt  +downstreamnt
atgggggccgccatcctgccgctcccggcgccggacggcgacggcgactcccatccgcaa
cagccgcctccccctcctcccggcggaggcgcgaagcccgagccgccgccgacggtggcc
acccacacccgccccctcgggatcatccacccgccccccgacatccgcgtcatcatcgag
aagacggccaccttcgtctccaagaacggcccggagttcgagcgccgcatcatctcccac
aacgccggcaacgccaagttcaacttcctccagccctccgacccctaccacgcctactac
cagcaccgcgtctccgagctcgctgccgctcccccctccgccgccgcctccgccgccgac
gcggcccccgagcccgacgaatccggcgccgcgccgccgccggccgactccgctgccgcg
cccaccgtcgatggcgaggcggcgaaggcggaccactccgccccattccgcgtgccgccg
cccaccaaggtgctggtgccacccaaggcggagctctacacggtgcatctgcccgagggg
atcaccggggaggagctggacatcatcaagctgaccgcgcagttcgtggcgcgcaacggg
aagagcttcctgacgagcctggcgcagcgcgagagcaccaacccgcagttccacttcatc
cgccccacgcacagcatgttcaccttcttcacgaagctcaccgacacctattcgagggtg
ctgaacccggtcgaaggcatgcctgccctactgaaggacctacaagacggggcgaaggac
ctgaccaccgtgttggagcggtgcctgaaccgcctggagtgggaccggtcgcaggagcaa
gcgaggcagcaggctgaggatgaaatcgaacaggagaggatgcagatgcagatgatcgat
tggcatgattttgttgttgtcgagacgatcgagtttgcagatgatgagtgcgagggactc
cctgtgccacttacgctggaggagttgaagcgtcggaagaggattgaggacctgggagag
gaggaggcagccatggaattggccgagccagcgaaggatgttgagatggagatggacgag
gaggagattcaacttgttgaggaaggaatgcgtgcagcaaggctcgaggaaaatgaagga
ggagttcaagttaagcttgctggtgatgaggagccgcctatgaggattgtcaagaactac
aagaggcctgaggagagaatccctgcggagagggacccaacgaaattcgttgtctcacca
ataactggggagctcattccaattagtgagatggaggagcacatgcgcatctcgcttatt
gatccaaaatataaggagcagaaagagcggatgttggcaaaaattaaggagacaacactt
gctcctgatgatgaaatctccaggaacattgtgggtcttgcccgtaccaggccagacatc
tttggaacaacagaggaagaggtctctaatgctgtcaaggcagaaattgagaagaaaaag
gatgaacagccaaagcaggttatttgggatggccattctggtagcataggtcgtactgcc
acacaggctctgtctatgggcggcgaggaacaggttgatgcttcgaatgttcctggtcca
gctccacttccccgccctcccatgccattgcttagacctcctcagccacttccactggtt
aatgttccacgctttcaacctagtgcaatgccatatcccccacaccaacaacctcatctc
atgcaaggagttccacatatgatgcctaccatgcatccgcctccaccaccgccaatacca
ggtcagccgcaggtgattaggatgccaggttcaatgggtcctatgccaaccaatatacct
ccgcctccaccaggccaaaatccctacatgcctggcccgccgcgtccatactccatgcct
ccaccgccacacatgccaaccatggcaaccatggtcaaccccattgggattcctcagcct
ccaccacctttgcctccacaaccacctgctgaggagcagccacctcaacctgatgaacca
gaacctaaaaggctgagaacagatgacgcttctcttataccagcagaacagttccttgct
cagcacccgggccctgctcacatctcagtgtctgtacccaaccttgatgaaggaaacctg
cgaggccaagtgttggagatcggtgtccaatcactctcagacacagttggcagtctaaag
gagcagattgctggagagttgcagctccctgctaataagcagaagttgagcgtgcggact
agtttcctcaaagacaatctcactcttgcttactacaacattggccctggagtggtgatc
aatttaacactgagggagcgtggtgggagaaagaaatga

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