Oryza sativa japonica (Japanese rice) (RAPDB): Os02g0293800
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Entry
Os02g0293800 CDS
T02163
Name
(GenBank) Conserved hypothetical protein
KO
K23720
UV-stimulated scaffold protein A
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Os02g0293800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dosa03400
]
Os02g0293800
DNA repair and recombination proteins [BR:
dosa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
Os02g0293800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF2043
UVSSA_N
IMS_C
Motif
Other DBs
NCBI-ProteinID:
BAF08515
RAP-DB:
Os02g0293800
UniProt:
B7EUG0
LinkDB
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Position
2
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AA seq
627 aa
AA seq
DB search
MRSKLFRSLLTDVLDGFLPLAVGFRRAHPLPPPAASATLLRKAAVQALERWHHLFGAHYR
QLRLAVEYLKESARVQFPGLRAAVEARAAREARTQEILTAKVEQLRRNLAAIKAEIRSAI
DEIRNGLDIIRIESEKFNNYANDEDEEQEIASLAMRSIRMASLMAGEWVPETQENEAVFD
ALRESYRLLVSKHLVTVQEWISVLVRVNLADNRFRDSALKEFIDVKNEIRAVRNRCSELG
LNLDNVHRRKGVQEEEDDDFWVEGNIEVPSPGRVGTSADVASSSKDTRKGKKPVGGTDTD
DGKAPNAGNSPQELDPERAKLHAEAPVLPWSSVLDRWGSNRDALVNQRGLELESHWGRVD
NDAVIPAAKIAELNVHSSIYREDPVEILPCLAPLKKGGLCQRRDLKICPFHGPIVPRDAE
GNPIHQSDGHCDAEGNPVGQTDGHYDAAVSPIDPNEDSSDVRENMIMPDGSSDGECIYES
SPSRTANINNDISDSDVGHDLGKITVEQLARQAVQNVRKRDRDDKKALEKAQRARIRQHN
QDVLREAALASTSRSAADYDLPSPAVSRRGRRGKTKGPTLASMLKKKVTSKDRIAERLLN
ARARDATIREVSHTEDMSYREAFPNQW
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcgaagctcttccgctccctgctgaccgacgtgctggacggcttcctcccgctc
gccgtcggcttccgccgcgcccacccgctcccgccgcccgctgcctccgcgaccctgctc
cgcaaggccgccgtccaggcgctcgagcgctggcaccacctgttcggcgcgcactaccgc
cagctccgcctcgccgtcgagtacctcaaggagtccgcccgggtccagttccccggcctc
cgtgccgccgtcgaggctcgtgccgcgcgggaggctcgcacgcaggagatcttaactgca
aaggtcgagcagttgcgccgaaacctggcagcgattaaggctgaaatccgctccgcgatt
gatgagatccgcaatgggttggatatcattcgcatcgagagtgaaaaatttaacaattat
gcaaatgatgaggatgaggagcaggagattgcctctttggcgatgcggagtattaggatg
gcttctttgatggctggggagtgggttcctgagactcaggagaatgaagcagttttcgac
gcgttgagggagtcatatcggctccttgtgtcaaagcatttggtcacagttcaggaatgg
atatctgtgctggttagggtcaatctcgcagataatcgtttcagagattctgctttgaag
gaattcattgatgttaagaatgaaatacgagcggtgagaaatcggtgtagtgagcttggt
cttaatcttgacaatgtccataggcggaagggtgttcaggaggaagaggatgatgacttt
tgggttgaggggaatattgaggttcctagccctggtagagtaggtaccagtgcagatgtt
gcaagtagcagcaaggacactagaaagggaaagaagccagtaggtggcacggatactgat
gatggcaaggcacctaatgctggcaatagtcctcaagagctggatccagagagggcaaag
ctgcatgcagaagcccctgtgctgccatggagctctgttttggatcgttggggttctaac
agggatgcacttgtaaaccaaaggggacttgagctcgagagccattggggaagggtggat
aatgatgctgttatacctgctgcaaagattgcagaattaaatgttcatagttcaatatat
agagaagatccagttgagattctaccatgccttgcacctctgaagaaaggaggcctttgc
cagagaagagatctcaagatatgcccgtttcatgggcctattgttccacgagatgccgaa
ggaaatccaattcatcagagtgatggccattgtgatgcagaaggaaatccagttgggcag
actgatggccattatgatgcagcagtaagtcctattgatccgaatgaagacagttctgat
gtaagagaaaatatgattatgccagatggaagcagtgatggtgaatgtatttatgagtcc
tctccttcaagaacggcaaacataaataatgacattagcgacagcgatgtaggtcatgac
ctcggtaaaattacagtggagcagttggcgagacaggcagtgcagaatgtccggaaaaga
gacagggatgacaaaaaagctctggaaaaagcccaacgagcgagaattcgtcagcataat
caagatgttttgcgggaagcggctcttgcttcaacctcgcgctcagcggcagactatgac
ctcccttcgccagcagtgtctcgacggggacgccgaggtaagacaaagggaccaacactg
gcatcgatgctgaagaagaaagttacttccaaagatagaattgcagagaggcttctgaat
gctcgagctagggatgcgacaataagagaagtttcacatactgaagatatgagctacaga
gaagcattcccaaatcaatggtag
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