Oryza sativa japonica (Japanese rice) (RAPDB): Os02g0440000
Help
Entry
Os02g0440000 CDS
T02163
Name
(GenBank) Similar to Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00300
Lysine biosynthesis
dosa00470
D-Amino acid metabolism
dosa01100
Metabolic pathways
dosa01110
Biosynthesis of secondary metabolites
dosa01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Os02g0440000
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Os02g0440000
Enzymes [BR:
dosa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Os02g0440000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Pox_Rif
Motif
Other DBs
NCBI-ProteinID:
BAF08658
RAP-DB:
Os02g0440000
UniProt:
Q6ZG77
LinkDB
All DBs
Position
2
Genome browser
AA seq
490 aa
AA seq
DB search
MAAANLLSRALLPALNPNPSSHSNRVSPSAVSLRCRHGLTASVRASLSTAAPSPPPRPAA
AAADGRAPKRCFRRGADGHLYCEGVRVEDAMGAAERTPFYLYSKPQVVRNFTAYRDALEG
LRSIVGYAVKANNNLRVLQLLRELGCGAVLVSGNELRLALRAGFDPTRCIFNGNGKTLED
LVLAAESGVFVNIDSEFDLENIVTAARVAGKKVPVLLRINPDVDPQVHPYVATGNKTSKF
GIRNEKLQWFLDSIKSYSNDITLVGVHCHLGSTITKVDIFRDAAGLMVNYVDEIRAQGFE
LEYLNIGGGLGIDYHHTDAVLPTPMDLINTVRELVLSRDLTLIIEPGRSLIANTCCFVNR
VTGVKSNGTKNFIVVDGSMAELIRPSLYGAYQHIELVSPSPDAEVATFDIVGPVCESADF
LGKDRELPTPDKGAGLVVHDAGAYCMSMASTYNLKLRPPEYWVEDDGSIAKIRRGESFDD
YMKFFDNLSA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccaaccttctctctcgcgcgctcctccctgctctaaaccctaacccaagc
agccacagcaaccgcgtcagcccttcggccgtatctctccgctgccgccacggcctgacg
gcctccgttcgcgcctctctctccacggcagcgccgtccccgccgccgcggccggcggcg
gcggcggccgacggtcgggcgccgaagcgctgtttccggcgcggcgccgatgggcacctg
tactgcgagggggtgagggtggaggacgcgatgggggcggcggagcggacccccttctac
ctctacagcaagcctcaggtggtgcggaacttcaccgcctaccgcgacgccctcgagggg
ctccgctccatcgttgggtacgccgtcaaggccaacaacaatctccgcgtgctgcagctc
ctgcgggagctcggctgcggcgccgtcctcgtcagcgggaacgagctccgccttgccctc
cgggcaggattcgatcccactaggtgtatatttaatggaaatggaaagacattggaagat
cttgttttagctgcagagagcggagtgtttgtaaacatagacagtgaatttgatttggag
aatattgtcactgctgcgagagttgctgggaagaaagtccctgttttgctcaggataaac
ccagatgtggatccacaggtccatccttatgttgcgactggaaacaaaacctccaaattt
ggtatccgtaatgagaaactacaatggttcttagactctatcaagtcatactcaaatgat
atcacactggtgggtgttcattgtcatctgggatctaccattacaaaggtcgatatattt
agagatgcggcaggtcttatggtgaattatgttgatgaaattcgagcacaaggttttgaa
ctggaatatctcaatattggcggtggcctgggcatagattatcaccacacggatgcagtc
ttgcctacacctatggacctcatcaacactgtgcgagaattagttctgtcacgagatctt
acactcatcattgaacctgggagatccctcatagctaacacttgctgcttcgtcaatagg
gtcactggtgttaaatctaatggtacaaagaatttcattgtagttgatggcagcatggca
gagcttatcagaccaagtctatatggagcataccagcatatcgaactggtttctccttcc
ccagatgcagaagtagcaacattcgatattgttggaccagtttgtgaatctgcagatttc
cttggcaaagacagggaacttccaacacctgataagggagctggtttggtggttcatgac
gcaggagcctactgcatgagcatggcttcaacctacaacttgaagttgcgaccacctgaa
tattgggtagaagatgatgggtccattgctaagattcggcgtggagagtcatttgatgac
tacatgaagttctttgataatctctctgcctaa
DBGET
integrated database retrieval system
