Oryza sativa japonica (Japanese rice) (RAPDB): Os02g0470400
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Entry
Os02g0470400 CDS
T02163
Name
(GenBank) Cytochrome cd1-nitrite reductase-like, C-terminal haem d1 domain containing protein
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dosa04131
]
Os02g0470400
Membrane trafficking [BR:
dosa04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
Os02g0470400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_M
Vps62
VPS13_C
VPS13_VAB
C2
Motif
Other DBs
NCBI-ProteinID:
BAF08745
RAP-DB:
Os02g0470400
UniProt:
Q0E193
LinkDB
All DBs
Position
2
Genome browser
AA seq
2989 aa
AA seq
DB search
MYASTLNKSALVHRNHTREQRRQTVNVVQSSRGLSVKTKLHSLKIKDELQGRLSMSSNYL
ACSVINDNLETVDSSSPDEEDHRKSFSVEEDSFMDALTDFTPDQSPNLQDLEIPSNSIFD
PDGHTQLSSKDGLSFDGDQQKVKPTEVFYEAQDNNINDFVVLTFLTRTPDSCLYDGIDSQ
MCIRMSALEFYCNRPTLVALIEFGFDLSMVNSAPKGDSDTTPAVRNVKPTGMEDNARNFV
KGLLGYGKRRTIFNMKMDVDRVSMFLNKEDGSQLAMFVQEKFLFDLKVHPGSFSIDGMLG
NMRFCDMSLGPEHRWGWLCDIRKPGVESLIKFAFQSYSVDDDDYEGYNYSLIGQLSAVRI
VFLYRFVQEFTSYFMELATPHTEEAIKFIDKVGGFEWLIQKYEIDGASAIKLDLSLDTPI
IIVPKNSQSKDYIQLDLGQLKVRNGFCWRGGEESDPSAVRLDILQAEINGINMAVGVNGI
LGKSMIREGHGINIEVRRSLRDVFKRVPMLCMKFQIGLLHGIMSDKEYNVITSCISTNLS
EAPNLPPGFRDNVNRTKDSIRLLADKVNLNNHLLLSRTVVVMTVDVQYALFELRNGPDAE
SPLAELVLEGLWVSYRTTSLFEMDLYLSILKFLIHDIRPDTKSEMRLMLGSYSETSKLST
QDPSSDVGVSNLTMVILDYRWRSSFQSFVIRIQEPRVLVVLDFLLPVVEFFVPNLGTITG
REESLDPKNDPLIKSDDIILCEPVFFQRENFIQLSPGRQLIVDGCDIDDFTYDGCGGTIS
LCDEYDKKGQLYSGTIIILGRGKKLRFKNVKIENGALLRRCVYLNAGSSYSISAEDGVEV
SVLESSLNDNEDDNTQNEEYKRINALQPGADTPSAQMLNFTFEAQVVSPEFTFYDSSKLS
IDDSLHIEKLLRAKMDFSFMYASKEKDIWARSVVKDLTIEAGSGLLVLEPVDVSWKYTSV
SEKTNIVLASTDFGNNNPLVSCINFKRVWTSPNGELPGYNLTFWRPQAPSNYVILGDCVS
SRCVPPSQVVVAVSNTYGRVRKPLGFRLVHVLPVSLEQMNSSQAAEDNECSIWIPVPPPG
YIALGVTPGFSIWRVDNVIASFHAHNSIEQPTRVEALDLHHVLLRNPNCYIVKDLNADSS
VRSNQPADQLTHRKSTSGWDAVRNLSRPSSYCMSTPHFERIWWDKGGDTKRPFSIWRPIP
RFGFSSVGDCITEGFEPPTLGILFKCDSAIVSERPTQFKKVAQIDRKGSDEILFFWYPVP
PPGYASLGCVATKTDEMPSNDSVCCPKMGLVNHANILEDPISRSSSSKGPNCWSIWKVSN
QGCTFLATSDTKKPPAQMAYRIADHAKPKVRENITAELKFGCLSVSILDSSCGMVTPIFD
TTIANINLATHGKFETMNAVLICSISASTFNRHLEAWEPFVEPFDGIFKFETYDTSKHPP
SKVGKRIRVAATSPLNDTVDSVKNADDLSCSALDEDDFQRIVFENKLGCDIYVKKLEDNE
DIIELLQHENQVSLFMPPPRFSDKLSVLSNSTESRYYVIIQIFESKGLPIMDDGNDHSYF
CALRLLVGSDVSDQYKIFPQSARTRCVKPLKTCESQTHHAKWNEHFIFEVPEQASAHLEI
EVTNLASKAGKGEVLGSLSIPIGRGATILKRAASMRIIQQAADVKRVLTCPLTRKGQALN
HENVKHCGMLVLSSCYVERSTQTNFQSWKDSLSNAKSGFWIGLGPDGPWECFTAALPLST
IPKSLNNSHFALEVTMRNGKKHASLRALAIIANGFDIKLEVSVCPVTMHSSSVSNAGSTS
STSIIDEVFENQWYRPTSGWGSNPASDQGCDVGPWSTKDGSYSSKAFFEPRLPPGWKWTS
PWKIEISSSVDSDGWAYAANFQNLNWPSSWKSSKSPHDFVRRRRWVRSRQSMQEQSAEIP
RKIIAVMEPHASTALPWTAMIKDMDLCLQVRPFSEKSQESYSWSQVLSLGSESIPKQQQS
SLSRQSTLKQSSVPSKNSVLRLADLEKKDMLSYCCPPVGIKQNFWLSVGIDASILHTDLN
MPIYDWKICFNSILRLENKLPYEAEYAIWEKSTEGSMVERQHGIVSSGGSAFIYSADIRK
PIYLTMFVQNGWIIEKDYMNRSAGVRFESRDNNSSPARVAICVAVGSCKQYSIGVSLFDL
ENKEHVDVKAFTSDGSYYWFSAQLKMTSDRTKLRLEGYKWSTPFSIDANGVMCVLMNNTT
GNDQALVRVNVRSGTKCSRYEVVFQLACWSSPYRVENRSMFLPVRFRQVGGDDYSWRSLP
PNSSASFFWEDIGRRRLLEVLVDGSDPTTSMTYDIDVVMDHQPLAASSRVKKALRVTVLK
EGKFHVTQINDWLPDNRTREQTTERLLSPIFQPSEVDSGQSSPDLDSEFHVTLELTEFGL
SIIDHMPEEILFLSVQQLLLAYSSGMGSGINRLKMQMHWIQVDNQLPFVLMPVLFCPQRM
ENQSDYIIKFSMTLQTNNSLEFCVYPYLGVQVPENCVFFVNIHEPIIWRLHEMIQNLKFD
RISSSESSAVSVDPILKIGLLNISEIRFRVSMAMSPTQRPRGVLGFWSSLMTALGNMEHM
PVRIAQRYREELCMRQSALMSSAMSNIQKDILSQPLQLLSGVDILGNASSALSNMSKGIA
ALSMDKKFIQGRMRQDSKGVEDFGDVIRDGGGALAKGIFRGVTGILTKPIEGAKSSGVEG
FVQGVGKGLIGAAAQPVSGVLDLLSKTTEGANAVKMKISSAIMAEEQLARRRLPRAIGGD
SLLYPYDDHKAAGQAILQLAEYATFLGQVDLFKVRGKFASTDAYEDHFMLPKGKILLITH
RRVLLLQVPMMTQRKFSPAKDPCSVIWDVLWDDLVTVEMTHGKKDAPGSLPSKLILYLKA
KPTNSREVVRLVKCNRGSDQATLIYSSIDGAYKAYGPKSTKELLRWKVPRPYAPRNTSGR
TVQDLSYGNKPCKLQLVEDWKSSVRECPLAVAYTQRVVGRAGAQHLILI
NT seq
8970 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcttctacgcttaacaaaagcgctttggttcacagaaaccataccagggagcaa
aggcgccagacggttaatgttgttcaatcttctcgtggtttgagtgtaaaaacaaaactg
cattctttgaagataaaggatgagcttcagggtcgtctctctatgtcttcaaattatcta
gcatgctctgttatcaatgacaatttggaaactgtagattctagttcacctgatgaggag
gatcatcgaaaatccttctctgttgaggaagattctttcatggatgcgctgacagatttc
actcctgaccaaagtccaaatcttcaagatttggaaattccttccaactcaatatttgat
ccagatgggcatactcaattaagttcgaaagatggtttaagctttgatggggatcagcag
aaagtgaagcctacggaagtattttacgaggcacaagacaataatattaacgattttgtt
gtccttacatttttgaccaggactcctgattcttgtctttatgatggtatagattcgcag
atgtgtatccgtatgtctgcactggaattctactgtaacagaccaactcttgttgctctg
attgagtttggatttgatcttagcatggttaattctgccccaaagggtgactctgataca
acacctgcagtacgcaacgtcaaacctacagggatggaagataatgctcgcaattttgtt
aaaggtttgctaggctatggaaaacgccgaactatcttcaacatgaagatggatgtggat
cgggtatctatgtttcttaacaaggaagatggttctcagcttgcgatgtttgtgcaggag
aaatttctgtttgatctgaaggttcatccaggttcattttcaattgatggtatgctgggt
aatatgagattttgtgacatgtctcttgggccagaacatcgttggggttggctatgtgat
atacggaaaccaggtgttgaatctcttataaagtttgcgttccagtcttacagcgttgac
gatgatgactatgaaggttacaactatagtctgattgggcaactttctgctgtgcgaatt
gtattcctttatcgttttgttcaggagttcacctcttacttcatggagcttgccacccct
cacactgaagaagcaatcaagttcatcgacaaagttggaggtttcgagtggttgattcag
aaatatgaaatagatggtgcttctgctataaagctggatctttcacttgacacacccata
attattgttccaaagaactcccagagcaaagactatatacaactggatctgggacaactg
aaagttaggaatggtttttgctggcgtggaggtgaagagagtgatccttctgctgtacgc
cttgatattcttcaagcagagattaatggaatcaacatggcggttggagtcaatggtatt
ctaggaaagagtatgattagagaaggtcatggcatcaatatagaagtgcgacgtagcttg
cgggatgttttcaaaagggtcccgatgctctgcatgaaatttcagatagggttgctccat
ggtatcatgtcagataaggaatacaatgtcatcacaagttgcatttcgacaaacctatca
gaagcgcccaacctccccccaggtttccgtgataatgtaaatcggacaaaagattcaatt
cgtctacttgcagataaagttaatctcaacaaccatttgttactatcgcgtactgttgta
gtaatgactgtggatgtccagtatgcattgtttgagcttcgcaatggtccagatgctgag
tcacctctagcagagcttgtgctggaaggtttatgggtttcttataggacaacttcacta
tttgagatggacctttatttgtctatactaaaattcttgatccatgatatccgtccagat
acaaagtccgagatgcgccttatgcttggatcttattctgagacttctaagctgagtact
caggacccttcatctgatgtgggggtttccaacctcaccatggtgatattggattatcga
tggcgttcttcctttcagtcatttgttataagaattcaggaacctcgtgtacttgttgtc
ctggattttctgctgcctgttgttgagttttttgttccaaatctaggcacaataaccggc
cgggaggaaagtctagatccaaagaatgatcctcttattaagtcagatgacatcatactt
tgtgagcctgttttcttccagagagagaattttattcaactatctcctgggaggcagcta
atagttgatggttgcgatattgatgatttcacttacgatggctgtggaggcaccatatct
ttatgtgacgaatatgacaagaagggccagttatactcagggactataattattttgggg
cggggcaaaaaacttagattcaaaaatgttaagattgagaacggtgcattactgcggagg
tgtgtatatttgaatgctggaagcagctactcaatttctgctgaagatggcgttgaagtt
tcagtattagaaagttctctaaatgataatgaagatgataatacgcaaaatgaagaatat
aagagaattaatgctcttcagcctggtgcagataccccctcggcccaaatgctgaatttt
acatttgaggctcaggttgtatccccagaatttaccttttacgacagttcaaagttatca
attgatgattccttgcacatcgagaagcttcttcgcgccaagatggatttcagtttcatg
tatgcctcaaaggaaaaagacatatgggctcgatcagttgttaaagaccttacgatcgaa
gctggctctggtcttcttgttcttgaacctgttgatgtttcatggaaatatacttctgtc
agtgaaaagacaaacatagtacttgcatctactgattttggcaataataacccattggtt
tcttgtattaactttaagcgagtttggacatcacctaatggtgagttgcctgggtacaat
ctcaccttttggaggccacaagctccttcaaattatgttattttgggtgattgtgtgtcc
tcaaggtgtgtgccaccttctcaggttgtggttgctgtaagtaatacctatggccgtgta
cggaaacctcttggatttaggcttgttcatgtattacctgtatctctagagcaaatgaat
tcatctcaggcagctgaggacaatgagtgttctatctggattcctgttccaccacctgga
tacatagctctaggagtaactcctggatttagcatctggcgtgtcgacaatgtgattgct
tccttccatgcacacaattctattgaacaacccactagagttgaagctcttgatttgcac
catgttcttctccggaatcccaactgctatattgttaaagatttgaatgcagattcttct
gttcggagtaaccagcctgctgatcagttaactcatcgcaagagtacttctggttgggat
gctgttagaaatttgtcaaggccaagcagctattgcatgtctactccacactttgaaaga
atatggtgggacaaaggtggagatacaaaaagaccattttctatatggcggccaatacct
cgttttgggttttcctcagttggtgattgtataactgaagggtttgaaccacctactctt
ggtattctttttaagtgcgacagcgcaattgtttctgaaaggcctactcagtttaaaaaa
gtagcccagattgatagaaagggttctgatgaaatattattcttctggtatccagtgccg
cctcctggatatgcttctcttggatgtgttgcaacaaaaacagatgaaatgccaagcaat
gattccgtttgctgtccgaagatgggtctggtgaatcatgcaaatatcttagaggatcct
atatccaggtcctctagctcgaagggacctaactgctggagcatttggaaagtttcaaac
cagggctgcactttcctggcaacatctgatacgaaaaaaccaccagctcaaatggcatac
agaatagcagaccatgctaaaccaaaggtgcgggaaaatattactgctgagctgaagttt
ggatgcttgtcagtcagcattcttgacagttcctgtggaatggtcacgccaatttttgac
actacaatcgcaaatataaatcttgcaacacatggaaaatttgagacaatgaatgctgta
ttgatctgttcgatttctgcatcaacattcaatagacacctggaagcatgggaacctttt
gttgagccatttgatgggatattcaagtttgagacatatgataccagtaaacaccctcct
tcaaaagtcggtaagaggattcgtgttgctgccacaagtcctctaaatgatacagttgac
agtgtgaaaaatgctgatgatttgtcctgctctgctttggatgaagatgattttcagaga
atagtttttgagaacaaattaggatgtgatatttatgttaagaaacttgaagacaatgaa
gacattattgagctgctacagcatgagaatcaagtctcattgtttatgccacctcccagg
ttttctgataaactaagtgtactgtccaattctacggaatcaagatattatgttatcata
cagatctttgaatccaagggtttgcctattatggatgatggcaatgatcacagctacttc
tgtgctttgcgcttgcttgttggaagtgatgtttctgaccagtacaagatattccctcag
agtgccaggacaagatgtgtaaaacctttgaaaacttgtgaatcacagacacatcatgct
aagtggaatgaacattttatatttgaagtgccagagcaggcatccgctcatttagagatt
gaggtaacaaatcttgcatcaaaggctgggaaaggtgaagtacttggttcattgtcaatt
cctattggacggggtgcaacaatattgaaacgagctgcttctatgaggatcattcagcaa
gctgctgatgtcaagcgtgtgctaacatgtcctcttacaaggaagggccaagcactcaat
catgaaaatgtgaaacactgtggtatgttagtactttcaagttgttacgtagaaagatct
acgcagacgaacttccagagctggaaagacagcttaagcaatgcaaagagtggtttctgg
atagggcttggcccagatggtccatgggaatgttttactgcagctttgccattgtcaacc
atccccaaatcacttaacaacagccattttgcacttgaggtcaccatgaggaatggaaag
aaacatgcaagcttaagggctcttgctattattgcaaatggttttgacataaagcttgaa
gtatctgtctgtcctgtaaccatgcatagtagctctgtgtcaaatgctggttccaccagt
tccacaagcattattgatgaagtatttgaaaatcagtggtaccgaccaacttcagggtgg
ggaagtaaccctgctagtgatcagggttgtgatgtagggccatggagcacaaaggacggc
tcttactcatctaaggcattctttgaacctcgtcttccacctggctggaaatggacgtca
ccatggaaaattgaaatatctagttccgtggatagtgatggatgggcgtatgctgccaat
tttcaaaatttgaactggccatcttcctggaaatcttccaaatcaccacatgactttgtt
aggcgaaggcggtgggtgcgttcacggcagtcaatgcaagaacaaagtgcagaaattcct
aggaaaataattgctgttatggagcctcatgcatctactgcattgccttggacagcgatg
atcaaggatatggatttgtgcttgcaagttcgccctttttctgaaaaatcacaggaatca
tatagttggagtcaggttctttcactaggttctgagagcattcccaagcaacaacaatct
tcactttcaaggcaaagcaccttaaagcagtcatctgtgccctcaaagaattcagttctt
agactggctgatcttgagaaaaaggatatgctttcatattgctgtcctcctgttggcatt
aaacaaaatttctggcttagtgttggaattgatgcttccattcttcacacagacttaaat
atgcctatttatgactggaaaatttgtttcaactcaattcttagactcgaaaataagctt
ccatatgaagccgagtatgctatctgggagaagtccacggaaggtagtatggttgaaagg
cagcatggtattgtctcgtctggtggaagtgcatttatctattcagcagatatccggaaa
ccaatttacctaactatgtttgtccaaaatggctggattatagagaaggattacatgaac
cgctctgcaggtgtgcgctttgaatctcgggataacaattccagcccagcacgagttgcg
atttgtgtggctgttggcagttgcaaacaatacagtataggagtgtccctttttgatctt
gagaacaaggagcatgttgatgtcaaagcatttacttctgatgggtcatattactggttc
tcggctcagctgaagatgacttcagacagaactaagttgcggttggagggatacaaatgg
agtacaccttttagcattgatgctaatggggttatgtgtgtgctcatgaacaacactaca
ggaaatgatcaagctttggtgagagtaaacgttagaagtggaacaaaatgttcacgttat
gaagttgtatttcagctcgcttgctggtccagcccttacagggtagagaaccgctccatg
ttcttgcctgtacggtttcggcaggttggtggtgatgattattcatggcgtagtctgcct
ccaaattcatcggcttccttcttttgggaggatattggcagaaggcgtcttttggaagta
ttagtagatggaagtgaccctacaacctccatgacatatgacattgatgttgtcatggat
caccaaccgctagctgcatcaagcagggtgaagaaggctttgcgtgtcactgttcttaag
gagggaaagtttcatgttacccaaattaatgattggctgcctgataatagaactcgggaa
cagacaacagaaaggctattatcaccaatatttcagccatcagaggtcgacagtgggcag
tcatctccagatctggatagtgaatttcatgttactttggagctaacagagtttggactt
tccataattgaccatatgcctgaggaaattcttttcctctcagtgcagcaactattacta
gcctactcatctggaatgggctctggaatcaataggctcaaaatgcagatgcattggatt
caagtggacaatcagttacctttcgttcttatgcctgtccttttttgtcctcaaaggatg
gagaatcaatcagactacatcatcaagttctctatgacattgcagaccaataattctctc
gaattttgtgtttatccatatcttggtgtgcaggttcctgagaactgtgtgttttttgtt
aatatccatgagccaattatttggcgcctccatgagatgattcagaacctaaaatttgat
aggatatccagttcagagtcttctgctgtctcagttgaccctatactgaagattgggctt
cttaatatttctgaaatacgatttagagtctcaatggcaatgtcccctacccagaggccg
agaggggttcttgggttctggtcttccttaatgacggcactgggaaacatggagcacatg
ccggtccgcatagctcaaaggtatcgggaagaattgtgcatgagacaaagtgcactaatg
agttctgctatgtctaacattcagaaagatattctcagccaacctcttcaattactttcg
ggtgttgacattcttggcaatgcaagtagcgctttgagtaatatgagtaagggtatagca
gcattatccatggacaagaaattcattcagggccgaatgagacaggatagcaaaggagtg
gaagactttggtgatgtcatacgagatggaggtggggctctcgcaaagggcatcttcaga
ggtgttacaggcatattgacaaagcccattgagggtgcaaaatcttctggtgttgagggc
tttgtgcaaggtgtcggaaaaggtttaattggtgcagccgctcagccagtgagtggagtt
cttgatcttttgtcgaaaactacagaaggtgcaaatgctgtgaaaatgaaaatatcatca
gctataatggctgaggagcagttggctcgtaggcgtctccctcgagccattggtggtgat
agcttgctctatccttatgacgaccataaagcagctggccaggctatcttacaattagct
gaatatgctacatttcttggccaagttgaccttttcaaagtccggggaaagtttgcatct
actgatgcttatgaggatcattttatgctacctaagggtaaaattcttttaattactcac
agaagagtactactgcttcaggtcccaatgatgacccagagaaagttcagtcctgcaaag
gatccgtgctctgtaatctgggatgtattgtgggatgatttggtgactgtagaaatgacc
catgggaaaaaggatgctccaggatccttaccttcaaagcttattttgtacctgaaagct
aagcccacaaattctagggaggttgttcggttggtcaagtgtaatcgtgggtctgatcaa
gctacactgatttactcatcaattgacggagcgtataaggcctatggtccaaaatcaaca
aaggaattgctgagatggaaggtaccaagaccatatgcccctcgcaacactagtggtcgt
accgttcaggacttatcatatggaaacaaaccttgcaagttgcaacttgtggaagactgg
aagtcgagcgtacgcgaatgcccgctcgccgtggcctacacgcagcgtgtagtcggccgc
gcgggtgcgcagcacttgatcttgatctga
DBGET
integrated database retrieval system
