KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os02g0478900
Entry
Os02g0478900      CDS       T02163                                 
Name
(GenBank) Armadillo-like helical domain containing protein
  KO
K12828  splicing factor 3B subunit 1
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Os02g0478900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dosa03041]
    Os02g0478900
   03036 Chromosome and associated proteins [BR:dosa03036]
    Os02g0478900
Spliceosome [BR:dosa03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    Os02g0478900
 Complex B
    Os02g0478900
 Complex C
   U2 SnRNP specific factors
    Os02g0478900
Chromosome and associated proteins [BR:dosa03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    Os02g0478900
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_2 HEAT_ECM29 HEAT_EF3_N Htt_N-HEAT_1 XMAP215_CLASP_TOG Vac14_Fab1_bd
Other DBs
NCBI-ProteinID: BAH91694
RAP-DB: Os02g0478900
UniProt: C7IYP7
LinkDB
Position
2
AA seq 1206 aa
MRSVRFDIALDTCASRITSTKRSRGNFLPPNRSLLLPASNLPPNPNPLAPCRCRGHGRRD
RARAGAAPQCGGRCLSSVPFDADLYGGVSDPDRFASYETSIAATAEDDDDDDDATEPVNP
AARSLASYSGHAIASSSSGLPRAADEEGDGLRAREGEYHRRHPVRGMSPDRHDPFSAAET
TPDPSTRTYADAMRDNQPAPATKRRNRWDQSQEDEGDGAAATGAKKAKTASSSSSSHWDA
APDAATPGIGRWDATPGRAGGATPSLKRNRWDETPTPGRMADADGTPAPSVAWDSSSTPT
PKKQRSRWDETPAGVGSTAPRATDAVTPAGYAPGPTPFDAADLATPSPGQIARGPMTPEQ
YQLLRWERDIEGRNMPLTDEELDTMLPQVGYKILDPPASYQPIRTPARKLLATPTPLFTP
LYAIPEENRGQQFDVPKELPGGLPQMKPEDYQYFGTLLNEGEEEEKLSPEEHKERKILKL
LFKVKNGTPQQRKAALRQLTDKAQEFGAGPLFNKILPLLMQPTLEDQERHLLVKVIDRVI
YKLDDLVRPFVHKILVVVEPLLIDEDYYARVEARQIISNLSKAAGLATMIATMRPDIDNT
DEYVRNTTARAFSVVASGLGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILMGCAVL
PHLRSLVDIIEHGLSDENQKVRTITALSLAALAEAAAPYGIESFDTVLRPLWKGTKSHRG
KVLAAFLKAVGFIIPLMDVEYASYYTRGVIPILIREFQSPDEEMKKIVLKVVKQCVSTEG
VEADYIRNGILPEFFRHFWIRRMALDRRNYKQLVETTVEIANKVGVADIVGRIVEDLKDE
SEPYRRMVMETIEKVVAHLGASDIDRHQEELLIDGIVYTFQQQTSDDSNVILNGFETVAN
ALGQRVKPYVPQICGIIKWMLNTSSAKARQRAADLMSRIAIVMKLCQEERLMCHLGHILY
ESLGEEYPDVLGSILGALKAIVNVVGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLV
GRVADRGAEFVPAREWMRICFELLEMLKAHKKGIRRATANTFGYIAKAIGPEDVLATLLN
NLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPEFNVRNGILKSLSFLFEYIG
EMGKDYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLTLSGPTYL
RHLPMS
NT seq 3621 nt   +upstreamnt  +downstreamnt
atgcggtcggttcgctttgatattgcgttggacacgtgtgctagccgaattacatcgaca
aaaaggagccgtgggaattttcttcccccaaatcgttccctccttctccccgcctccaat
ctcccgccgaaccctaaccccctcgccccctgtcgctgccgcggccatggacgacgagat
cgcgcgcgcgcaggagcagcgccgcaatgtggaggacgatgcctatcctccgtgcccttc
gacgccgacctctacggcggcgtctccgaccccgaccgcttcgccagctacgagacctcc
atcgcggccaccgccgaggacgacgacgacgacgacgacgcgaccgagccggtcaacccc
gccgcccgcagcctcgcctcctactcgggccacgccatcgcctcctcctcctcgggcctc
ccccgcgcggcggatgaggagggtgacgggctccgcgcccgcgagggcgagtaccaccgc
cggcacccggtccgcggcatgtcgccggatcgccacgaccctttttctgccgcggagacc
actccggacccatccacgcggacctatgccgacgccatgcgcgacaaccagcccgcgccc
gcgacgaagcggcggaacagatgggaccaatcgcaggaggacgagggggatggcgccgcc
gctactggggccaagaaggcgaagactgcctcctcctcctcctcctcacattgggacgcc
gcccctgatgctgcaactcccgggatcgggcgctgggacgccacgcctgggcgcgccgga
ggtgcgacgccctccctgaagaggaatcgttgggatgagaccccgactccagggaggatg
gctgatgcggatggaacccctgcaccgtccgtggcgtgggattcttcttccaccccaacg
cccaagaagcagagatcaaggtgggatgagacgcctgcgggtgtggggagcacggcacct
cgcgctaccgatgctgttactcctgcaggttatgctcctgggccaaccccgttcgacgcg
gcggacctcgccacgccgtcacctggccagattgctcgtggcccgatgacaccggagcag
taccagctcttgcggtgggagcgggacatcgaggggcgtaacatgcctctgactgatgag
gaacttgacaccatgctcccgcaggtggggtacaagattcttgatcctccggcttcttat
cagcccatacgcacacccgcaaggaagcttctcgcgacgccgacaccgctgtttacaccg
ctctatgccatccctgaggagaaccgtgggcagcagtttgatgtgcccaaggagttgcct
ggtgggttgccacaaatgaagccggaggattaccagtactttggaacattgctgaacgag
ggagaggaagaggagaagctgtcaccagaggagcataaggagaggaagatcttgaaactc
ctgttcaaggtgaagaatggcacaccacaacagcggaaagcggcgcttcgacagctcacg
gacaaggcgcaggaatttggtgctggcccgctgttcaacaagatcctgccgttgctcatg
cagccaacgcttgaggaccaggagcgtcatcttctggtgaaggtcattgatagagtgata
tacaagctggatgatctggttcgtccgtttgtgcataagattcttgtggttgttgagcca
cttctgattgatgaggattactatgctcgtgttgaggcccggcagattatctcaaatctt
agcaaagcagctggacttgctactatgattgccaccatgagaccagatattgataacact
gatgagtatgtgaggaataccactgctagggcattcagtgtggttgcttctggtttgggg
attcctgctctcttgccattcttgaaggctgtctgccagagtaaaaagtcttggcaggct
cggcacactggtattaagattgttcagcagattgctattctcatgggctgtgctgttctg
ccacacctcaggtccttagttgatatcattgagcatggtctgagtgatgaaaaccagaaa
gtacggacaatcaccgcactgtctcttgctgcacttgctgaggctgccgcaccctatggt
atagaaagttttgatacggtgttgaggcctttgtggaagggtaccaaatctcaccgtgga
aaggtccttgctgctttcttgaaagccgttggtttcatcatccctcttatggatgttgaa
tatgccagttactacaccaggggggtgattccaatcctgattagggagttccagtcacca
gatgaagagatgaaaaagattgtcctgaaggttgttaaacaatgtgtcagtacagagggt
gtagaggctgactatatccgtaatggcatccttccagagttcttccgtcacttttggata
aggagaatggctctagatcgtaggaactataaacaacttgtggaaacaacagtggagatt
gcaaacaaggttggagttgctgacatcgttgggaggattgttgaggatctcaaagatgaa
agtgaaccttacaggagaatggtgatggaaacaattgagaaggtggtggctcacctgggt
gcctcagatattgatcgccatcaggaggagcttcttattgatggcatcgtgtatactttc
caacagcagacaagtgatgattcaaatgtcatacttaatgggtttgaaacagttgcgaat
gcacttggccagagggttaagccttatgttcctcagatttgtggtatcatcaagtggatg
ctgaacacctcgagtgcaaaagctaggcagcgagctgctgatctgatgtcaaggatagcc
attgtgatgaagctgtgccaagaggagcggctgatgtgtcacttgggtcatatattatat
gagtccttgggggaggagtatcctgatgtgctgggttcaatccttggagctttaaaggct
atcgtgaatgttgttggtatgacaaagatgacgccaccaatcaaagatcttcttcctcgg
ttgaccccaatcttaaagaataggcatgaaaaggtccaagagaactgtattgatttagtt
ggtagggttgctgatcgtggagcagagtttgtgccagccagggaatggatgaggatttgc
ttcgagctgcttgaaatgttgaaggctcacaagaagggtattagacgagccactgcgaac
acatttggctatattgcgaaggctattgggccagaggatgtgttggccactctattgaac
aacttgaaggtgcaggagcgtcagaaccgagtttgcactactgtcgcaatcgccattgtt
gctgaaacttgctccccctttacagttttgcctgcccttatgaacgagtaccgagtacca
gagttcaatgtccgtaatggtattttgaagtctctgtcatttctttttgaatacattggt
gagatgggtaaagattacatatatgctgtcacgccattgcttgaagatgctctgatggat
agagatctggttcatcggcagactgctgcctctgctgttaagcacatggcactaggtgtt
gctggcttgggttgtgaggatgctcttgtccacttaaccttgtctggcccaacatatttg
agacatctccccatgtcataa

DBGET integrated database retrieval system