Oryza sativa japonica (Japanese rice) (RAPDB): Os02g0482400
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Entry
Os02g0482400 CDS
T02163
Name
(GenBank) Similar to Ornithine decarboxylase (EC 4.1.1.17) (ODC)
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00330
Arginine and proline metabolism
dosa00480
Glutathione metabolism
dosa01100
Metabolic pathways
dosa01110
Biosynthesis of secondary metabolites
dosa04148
Efferocytosis
Module
dosa_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
Os02g0482400
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Os02g0482400
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
Os02g0482400
Enzymes [BR:
dosa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
Os02g0482400
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Motif
Other DBs
NCBI-ProteinID:
BAF08768
RAP-DB:
Os02g0482400
UniProt:
Q0E170
LinkDB
All DBs
Position
2
Genome browser
AA seq
457 aa
AA seq
DB search
MAAAEGYQMEAAVLAAPVVKDREVLRLRRDAAGRRDVTGLVRTIVAAAPPPDSTTRTAAA
GAFNVIDLGEVARLFAAWWRGLRGVRPYYAVKCNPNPALLGALAGLGAGFDCASRAEMEA
VLALGVAADRVVYANPCKLEPHLEYAAGVGVDLTTFDSEEEVGKIKRCHPGCRLLLRIKA
PDGDDGGGAMLNLGTKYGAHRDEVVPLLAAARRAGMAVVGVSFHVGSAVSRVGIYAAAIE
AARVRRRRRARHAAHARARHRRGIQGRRRRRRIHVPGGKRRDQRGPREALRWRRHAQRRR
GDSRAGALLRRDGVRARRPHLREAHARRGARVLDRRRHVRHPVLRALRELRAAPGAGDRH
RRRRRRAGGDHGRRDDDHVDEHVDEDAPVDGVRPHAGLVRRGGEGLSAAGAVHRGLAGVR
RRRRVHHRVQLRLQRVLHVQHEDLPRLLLLDHWESAT
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcagaaggatatcagatggaggccgccgtgctcgcggcgcccgtggtgaag
gaccgggaggtgctccgcctccggcgagacgcggccggccgtcgagacgttaccggactc
gtgcggaccatcgtcgccgcggcaccgccgcccgacagtacgacccgcaccgcggcggcg
ggcgcgttcaacgtgatcgacctcggcgaggtggcgcggctgttcgcggcgtggtggcgc
gggctccgcggcgtgcgtccctactacgccgtcaagtgcaaccccaacccggcgctgctc
ggcgcgctcgcggggctcggcgccggcttcgactgcgccagccgcgccgagatggaggcc
gtgctggcgctcggcgtcgcggccgaccgcgtcgtctacgcgaacccgtgcaagctggag
ccccacctggagtacgcggccggcgtcggcgtcgacctcaccaccttcgactccgaggag
gaggtcggcaagatcaagcgctgccacccggggtgccggctgctgctacggatcaaggcc
cccgacggcgacgatggcggcggcgccatgctaaacttgggaaccaagtacggcgcgcac
cgggacgaggtggtgccgctcctcgccgccgcgcggcgagccgggatggccgtcgtcggc
gtctcgttccacgtcgggagcgccgtgtcccgcgtcggcatctacgccgccgccatcgag
gcggcccgcgttcgacgccgccgccgcgctcggcatgccgcgcatgcacgtgctagacat
cggcgggggattcaaggccggcggcggcggcggcgaatccacgttccaggaggcaagcgc
cgtgatcagcgcggccctcgcgaggcacttcggtggcgacgacatgcccagcggcgtcga
ggtgatagccgagccggggcgctacttcgccgagacggcgttcgcgctcgccgcccgcat
cttcgggaagcgcacgcgcggcgaggtgcgcgagtactggatcgacgacggcatgttcgg
caccctgtgctgcgtgcacttcgagaactacgtgccgcgcccggcgccggtgaccgccac
cgccgacgacggcgacgagcaggcggcgaccatgggcggcgagatgatgatcacgtcgac
gaacacgtcgacgaagacgcacccgtcgacggtgttcggccccacgctggactcgttcga
cgaggtggtgaggggttatcagctgccggagctgtgcaccggggactggctggtgttcga
cgacgtcggcgcgtacaccaccgtgtgcagctcagacttcaacgggttctccacgtccaa
catgaagacctacctcgcctactcctgctagatcactgggaaagtgccacctaa
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