Oryza sativa japonica (Japanese rice) (RAPDB): Os02g0596100
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Entry
Os02g0596100 CDS
T02163
Name
(GenBank) GLE1-like family protein
KO
K18723
nucleoporin GLE1
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03013
Nucleocytoplasmic transport
dosa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Os02g0596100
03015 mRNA surveillance pathway
Os02g0596100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dosa03019
]
Os02g0596100
Messenger RNA biogenesis [BR:
dosa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
Os02g0596100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Borrelia_P83
Motif
Other DBs
NCBI-ProteinID:
BAF09233
RAP-DB:
Os02g0596100
UniProt:
B7EM97
LinkDB
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Position
2
Genome browser
AA seq
612 aa
AA seq
DB search
MGFARVELRCPRALDPRPSWTLGDVLTELDALEATRRTAQPTPLKQPPEWASSGSVREKA
FVMRVEEEDDTDEDDYDSDGESRALVAKATGARFSCNDLESSDAEESEDEMDGRIAPYHL
MEKRSLEKSILLELEREHHLKVQEEVRSKLSALEVCHQSEIQRTVSAFARLQKYAESRKE
IDRRLDVHFQRKIAEVLDKHLSMVQRDHEQKSQIVERRIRDDAALEEAKRKEQAMKDEKI
RQERAKQEAEARQKAAAKLAVEAQKAAAEAAAKEAAEAQKAAAEVSKSSQNSQNNVAGTM
RANKSEIKSELPGIKVFADHSALEAELRRRALLDQVPANIHSSKEFSRYDRQIAKSIGKL
MPTTDSVKARAGELIKALDGQDCPRPIACRIFANKIISIVKSRNTKDKTFGNLAFACGYV
MLLVTSQVPDAMDYLLAEFHRVCMYTVPKHLHALNAQVRNRDYYRLIGYQEENGQLESTE
SYLTYVAAYVKLYAAMIQTEIRGVRHPHGLAEGWKWLAMFLNTLPATTATACALHAFLKV
AGFALHKKYGSQFMKLLDVILRCFLPALKEQGSRIQAEAASNLQNYLTDKVYLEEPEGQY
LAQQLLSKELFT
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgcgcgcgtggagctgcggtgccctagggccctcgacccccgcccgagctgg
accctcggcgacgtcctcaccgagctcgacgcgctcgaggccactcgccgcaccgcgcag
cccacgcccctcaagcagccgccggagtgggctagcagtggcagcgtgagggagaaggcc
tttgtgatgcgggttgaagaggaagatgacacggatgaggacgattacgacagtgatggg
gagtcccgggctcttgtggccaaggccactggagcaaggttctcatgcaatgatcttgaa
tccagtgatgctgaagaatcagaggatgaaatggatggcaggattgcaccatatcacctg
atggagaaacggagcctagagaagagcattctgcttgagctggaacgtgagcatcatctg
aaagttcaagaggaagtcagaagtaaactatctgcattggaggtatgccaccaaagtgaa
atccagcgaacagtttctgcatttgctcgactacagaaatacgcagaatcaagaaaagag
atagacagaaggctagatgtccacttccagagaaaaattgcagaagtacttgataaacat
ttgtctatggtccaaagggatcatgaacagaaatcgcaaattgtggaacgtagaataaga
gatgatgctgctcttgaagaagctaaaagaaaggagcaagccatgaaggacgaaaaaata
aggcaggaaagagccaaacaagaagcagaggccagacagaaggcagctgcaaagttagca
gtggaagcacagaaagcagcagctgaggctgctgcaaaggaagcagcagaagctcagaaa
gcagcagctgaggtttccaaatccagccaaaattctcagaacaacgttgcaggaacaatg
agggcaaacaagagtgaaattaaatctgaattaccagggatcaaagtctttgctgatcat
tctgcactggaagcagaattgcggaggcgtgcattacttgatcaagtgccagcgaacatt
cattccagcaaggagttcagcagatatgaccgacaaattgcaaaatctattggtaaactt
atgccgactactgacagtgtaaaagcaagggctggtgagcttattaaagctttggatgga
caggattgcccacgtccaattgcttgccgtatatttgcaaacaagattatttcaatcgtc
aagagtagaaatacaaaggacaaaacatttggaaatttggcctttgcttgtggatatgtc
atgcttctagtcaccagccaggtaccagatgcaatggattatcttctagctgagttccac
agagtttgcatgtacacagttccaaagcatctgcatgctttaaacgcacaagtacggaat
agagattattacagactgattggctaccaggaagaaaatggacaactcgagagcactgaa
agttatttgacatatgttgccgcatacgtcaagctgtatgctgcaatgattcagaccgaa
attaggggcgtgcggcatccacatggcttagctgaggggtggaaatggcttgccatgttc
cttaatactctcccggccaccacagcaactgcttgtgcccttcatgctttcctcaaggtt
gctggttttgcacttcacaagaaatacggatcacagttcatgaaacttctagatgtaata
ttgcggtgcttcttacccgctttgaaggaacaaggctcacgaattcaggctgaggctgca
agtaatctacagaattatctgactgacaaggtttaccttgaggaaccagaaggccagtac
cttgcgcaacagcttctatctaaagagttgttcacgtga
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