KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os02g0602600
Entry
Os02g0602600      CDS       T02163                                 
Name
(GenBank) RNA-binding region RNP-1 (RNA recognition motif) domain containing protein
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Os02g0602600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dosa03019]
    Os02g0602600
   03041 Spliceosome [BR:dosa03041]
    Os02g0602600
Messenger RNA biogenesis [BR:dosa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     Os02g0602600
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     Os02g0602600
Spliceosome [BR:dosa03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    Os02g0602600
SSDB
Motif
Pfam: RRM_1 RRM_7 RBD_RDR6
Other DBs
NCBI-ProteinID: BAF09273
RAP-DB: Os02g0602600
UniProt: Q0DZR5
LinkDB
Position
2
AA seq 415 aa
MARKRKRGRTRRATQAEAEVEQSEREMVGDEAVEEEEDDDVTKMNPPPATAGEREEEEEE
EGIEGLLEPFTRNELLDLLVEACLRNPALRSRLAATAESDAAHRRLFVHGLSPGVTAAAM
AAAFAPFGALDECHAVADRATGRCRGYGFVTFRRRSAARRALAADASSRLAVGGRPVACQ
LASLGPTSPDRKLFVDNVPARAAHDELRRLFSRFGEIEAGPLGADRATGQFRGYAIFFYK
YPEGLTKALEERKVVFDGCELHCRRAHRVNKEKHLMTMPADAGAQSNGFENAASPIIHVQ
PKELALASTTQTPLGSNRPVEMMAKGPRSGTVPFRQNAGAGLLGACPVATVTSSTPDQST
PVSHSGASISTPRTAQRLAKSAQLVKQGIVIVPWTALSHWYNTRMVVVVLDEDGG
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggctcggaagaggaagcgggggcggacgcggcgcgccacgcaggcggaggcggaagtg
gagcaatccgagcgagaaatggtaggggatgaagccgtggaggaggaggaggacgacgac
gtcacgaagatgaatccgccgccggcgacggccggtgagcgcgaggaggaggaggaggag
gaaggaatcgaggggcttctggagccgttcaccaggaacgagctcctcgacctcctggtc
gaggcctgcctccggaaccccgccctgcgctcccgcctcgccgccaccgcggagtccgac
gccgcccaccgccgcctcttcgtgcacggcctcagccccggcgtcaccgccgccgcgatg
gccgccgccttcgcccccttcggcgcgctcgacgagtgccacgccgtcgccgaccgcgcc
accggccgctgccgcggctacggattcgtcaccttccgccgccgctccgccgcgcgccgc
gcgctcgccgccgacgcctcctctaggctcgccgtgggcggccgccccgtcgcgtgccag
ctcgcgtcgctcggccccacctcccccgaccgcaagctcttcgtggacaacgtgcccgcg
cgcgccgcccacgacgagctgaggaggctcttctccaggttcggggagatcgaggcgggg
cctctcggcgccgaccgcgccaccggccagttccgcggctacgccatcttcttctacaag
taccccgaggggcttacgaaggctctcgaggagcgcaaggtggtgttcgacgggtgcgag
ctccattgccggcgcgctcacagagtgaacaaggagaagcatctcatgaccatgcctgca
gatgcaggggcacagagcaatggcttcgagaacgctgcctcacccatcatccatgtccag
ccgaaggagcttgcattggcatccaccacgcagacgcctcttggatcaaatcggccagtt
gagatgatggcgaaggggcctagatcaggcacggttccctttcgtcagaacgctggagct
ggtctcttgggtgcatgccctgtggctacggtcacgtcctctacgccagatcagagcaca
ccggttagccattctggagcttcaatttccacaccccggactgctcagagattggctaaa
tcagcgcagcttgtgaagcagggcattgtgatcgtgccatggacagcactttcacattgg
tataacaccaggatggtggttgtcgtgctggatgaggatggtggttag

DBGET integrated database retrieval system