Oryza sativa japonica (Japanese rice) (RAPDB): Os02g0642600
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Entry
Os02g0642600 CDS
T02163
Name
(GenBank) Hypothetical protein
KO
K28108
shortage in chiasmata 1
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dosa03036
]
Os02g0642600
Chromosome and associated proteins [BR:
dosa03036
]
Eukaryotic type
Meiosis-specific proteins
Others
Os02g0642600
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHOC1_PDDEXK_dom
SHOC1_2HhH
SHOC1_N
SHOC1_ATPase
SHOC1_HhH_tandem
ZIP2_M
Motif
Other DBs
NCBI-ProteinID:
BAF09470
RAP-DB:
Os02g0642600
UniProt:
B9F1C0
LinkDB
All DBs
Position
2
Genome browser
AA seq
1519 aa
AA seq
DB search
MKIHLDFIDIETDIKIRYQSDLPESVYQVEKVPVKDNDGNGHSSLREDCCLEIAALDHGA
VIPRLEVSRNSWELDDCLTETDRYGVFDNVVRHLDEAQIQHSVFKSTEFLRSTDMDMLTF
VCEDAPCHDIQVDKPAEIKAAVEMDVVRINGNILLEKNSALYPLKPDGTCSDLPCSILLE
EVQIIDFPSDNVFKMLVQSETNKMNISDEIFKDDFDPARRLYESMVSCELALVDDTFRSL
PTPILNDDIAVRSRVPPIQEILCSLKPHPLSASDGIYLDWHLLLEGPCNREICCSYASMV
EEAKTCHLSSELQRSCQSTSVFVSDFLEDFQRSPKLQDEDKHSDIYVPAPLSHDPQKLEA
TQKCEQEGGTRNHSSMKRPSPEKSSSFPELISHSGDLNFYLNVRSATKSGTNNENTSTLD
VPHSEEQALSLSTRAKVDKLIEIHPVSPSNLIQGLIEQIHASYTSALQESTYWRHSFSDE
QGLGISKQKLLELITGEGSEGSYNHCEHKDKMELIVLYALKQVAYYLCFFGLHAAHLYIS
NLTRSLENTPERLKHILWSISEAQRKSERQLFESHPSLSCIETILRSNKQIDQKILIVAD
RAFWLPLGQKLASMRMTFVEFGQNPATTFVDLVNKTNSTAWVLEELLKSDCILLDNKNIP
ASFPFDKFGIILEYGGPNKSSTLLSLAPKLDGLPPLHFLYVKVDGKDFPAALVEDNHKDQ
DLKSTLDKVLLTLQKDLQERMNKMRIVDSLNFIPATNQLQGLQEKRSKHFAADATKELLP
DDQPHRLQNLNKKNTFDSHNVVLADEQLHIQQTLSNKPVVNSQCVPTVEKSSSTSSVSAN
VLKDPQENQSTTDLPSCVKNDCIMPGRLSVPDVVIVVNTGNHGKTMLVSRRSSYQQILAL
EKGGMQVVERDIDLPVDLILSAAVCLVWYETALFEANELTTSAETSGIKENVENIATNIL
MSVSFSFTGCIMNSFLVLLQVFEGEADFLSAVMDSSDSLYTAAASLDMNLQLFFSHTPRS
TDEIILNCITNVTSCYKAPLPDIPESESLAESFLTSFPSINPVSAYMLLSSGGSLVEFLS
WPHERRIQAVGKYLLSPKIISLFNALCKFGELGESRSVMTECSSVDSDISSAFLQSPRKR
KQRSLQACAVPTNKLLFSDSLNQIPGDYAEHAEVFSPSKLRKFSDMDNTIPELPDVFTFD
ESLNMRSEGFSYQQKKHDVDAIPGNQVINDDFSNGLTPNNQAYNRRTGNMVDTFDLPWQP
EFGGTHPSKSTFHTSRPSCSRTHSNPVFSTAFEINDDPGEWNISGGTKQTWKGLAHGGTV
DDSYRYDMDNRYHEPRDEIMQHPASSLAFQKLDFGSHATSQGSCWEIDYLRQMSAKRKAR
QERSRCSNSPGMSIPRMRDSNSKILNPPPKESFRYRGDRDTPSRDQSPSIGTQHYGKGKE
GAKAQNRRARKDFNVQPTSHKKRIEPSIDPTWTPIDKRARQKLSFVTYGKEKQSKLVWRN
QNSPGVGCGFRKRFREEGT
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatccatttggatttcattgatattgagaccgacataaaaataagatatcaatct
gatcttccagagtcagtgtatcaagtagaaaaggtccctgtaaaagacaatgatggcaat
ggccattcttctctgagagaagactgctgcttggagattgcagcactagatcatggtgca
gtaatacctcgattggaagtaagtaggaattcttgggagctcgacgattgtctgactgag
actgacagatacggtgtttttgataatgttgttagacacttggatgaagcacagattcag
cattcagtgtttaaatcaaccgagttcttgagatcaactgacatggacatgctgaccttt
gtttgtgaagatgcaccatgccatgacattcaagtagataaaccagcagaaatcaaagct
gcagtagaaatggatgttgtgaggatcaatggcaatattctgcttgagaaaaattcagca
ctctaccctctcaagcctgatggcacctgttcagacttgccttgctccattcttttagag
gaggtacagatcattgattttccttcagataatgtattcaaaatgcttgttcagtcagag
acaaataagatgaatatatctgatgaaatattcaaagatgattttgatccagcaagacgt
ttgtatgaatcaatggttagctgcgagttagcactggttgatgatacatttaggtcattg
cctacacctattttaaatgatgatatagcagttaggtctagggtccctcccattcaagaa
atactatgctccctaaaaccacaccctctatcagcatctgatggaatttatttggattgg
catctcttactggaaggaccatgcaaccgggagatttgttgttcttatgcaagcatggtt
gaggaggcaaaaacttgccatttaagttctgagctgcaaaggagttgtcagagtacatca
gtatttgttagcgattttctggaggattttcagagaagtccaaagcttcaagatgaggat
aaacatagcgatatttatgttcctgccccactgtctcatgatccacaaaaattggaagca
actcaaaaatgcgaacaagaaggtggtactagaaaccatagttccatgaaaagaccgagt
ccagaaaagtcatcttccttccctgagttaatatcacattctggtgacctaaatttttac
ttaaacgtcagaagtgccactaagagtggaaccaataatgagaatacttctactttagat
gtcccgcattcagaagagcaagcattatctctttcaaccagggctaaggttgacaaactc
atagaaattcatcctgtcagcccctcaaatcttattcaaggccttatagaacaaatccat
gcaagctatacatctgctctgcaagaaagcacatattggaggcattctttctcagatgag
caaggtttaggaatctcaaagcagaaacttcttgaactgataacgggagaaggttcagaa
ggctcgtacaatcactgcgaacacaaagataagatggaactcattgtactgtatgcatta
aagcaggttgcatattacttatgtttctttggtctgcatgcggcccatttgtacattagc
aacctgactagaagcttggaaaacactcctgagaggttaaaacatattctatggtccatt
tctgaagcacagaggaaatctgagaggcaactgtttgaatctcatccgtcattgtcatgc
attgagactatcctgagatctaataaacaaatcgaccaaaagatccttatagttgctgat
agagctttctggctgccactgggtcaaaagctagcatccatgaggatgacatttgttgag
tttggacaaaaccctgcaacaacttttgtggatctggtgaacaagacaaactctacagct
tgggtgctggaagaattactgaaatcagattgcattctgctagataacaagaacattcca
gcttcattcccttttgacaagtttggcatcatactggaatatggaggcccgaataaatca
tctaccttgttatctctcgctcctaaattagatggtttgccacctctgcatttcctctat
gtcaaagttgatggcaaggactttccagctgctctagtcgaggacaaccataaagaccag
gatttgaaatctacattggataaagttttgcttacacttcagaaggatttgcaggagagg
atgaataaaatgcgtattgttgattcgttaaacttcataccagcaacaaatcaactgcaa
ggtcttcaagaaaaacggagcaaacattttgctgctgatgctacaaaagaactgcttcca
gatgatcaaccacacagattacaaaatcttaacaagaagaatacttttgattcacataac
gttgtgcttgctgatgaacagctacatatacagcaaacactgagtaataaacctgttgtc
aattcacaatgtgtacccacagttgagaagagtagctctacttcttctgtatctgccaat
gtgctgaaagaccctcaagagaatcagtccactactgacttaccttcctgtgtgaaaaat
gactgcatcatgccaggaagactgtccgtcccagatgtagtgatagttgtaaatactgga
aatcatggaaagacgatgcttgtttcgcgaagatcatcttatcagcagatactagctctg
gagaaaggaggaatgcaggtcgtggagcgagatattgatctgcctgtggatctgatactc
agtgctgctgtctgcctagtatggtatgagactgcgctctttgaggccaatgaactaaca
acatcagcagagacatctggtataaaagaaaatgtagagaatattgcgaccaacattctg
atgtcagttagtttctctttcactggctgcatcatgaacagtttccttgtacttttgcag
gtctttgagggagaagctgacttcctttctgctgtaatggactcatctgattcattgtat
actgcagctgctagtttggacatgaacttgcagctgttcttctcacacacacccaggtca
acagatgaaataattctcaattgcattacaaatgtgactagctgttataaagctcctctt
ccagatatacctgaatcagaaagcctggctgaatcatttctcacaagtttcccttccatc
aatcccgtgtctgcatatatgttactttcttctggaggcagccttgtggagttcctcagt
tggccacatgagcgccgtattcaagcagttggaaagtatcttttgtctccaaagatcatt
tccctatttaatgctttgtgcaaatttggtgagttaggtgaatcaaggtctgtaatgact
gaatgctcttcagtcgattcagatatcagtagtgcattcctgcagtctccgaggaaaagg
aaacagcgttcattgcaggcttgtgcagtaccaactaataagctcctcttttctgattct
ctaaaccaaatacctggtgactatgcagaacatgctgaggtattctcaccttctaagttg
aggaagttctctgacatggataatacaattcccgagctcccagatgtctttacattcgac
gaaagtttgaatatgagaagtgagggattctcttatcaacaaaagaagcatgatgtggat
gcaatacctggtaatcaagtcattaatgatgatttcagcaatggattgacaccaaataat
caagcatataacagaaggactggcaatatggtggacacattcgacttaccctggcaacct
gaatttggtggtacgcatccaagcaaaagcacttttcacacaagcagaccatcttgcagc
agaactcatagcaatccagtattttcaactgcatttgagatcaacgatgatcctggtgag
tggaacatttcaggaggtacaaaacaaacatggaaggggcttgcacatggaggtactgta
gacgactcttacagatatgatatggacaacagatatcatgaaccaagagatgaaattatg
caacatccagcaagttcgcttgcttttcagaaactagattttggtagccatgcaacttca
caggggtcatgctgggaaattgattatctaaggcaaatgagtgcaaagagaaaagcacgt
caggagagatctagatgtagtaattcaccaggtatgtcgatcccaagaatgagagatagc
aactcaaagattctaaatcctccacctaaagaatccttcagataccgaggagatagagac
actccttcgagggaccagagcccttcaattgggactcagcattatgggaaaggcaaggaa
ggagctaaagcacagaatcgcagagcaaggaaagatttcaatgtacaaccaacaagtcac
aaaaagaggatagaaccgtccattgatccaacatggactcctattgacaagagagcaaga
cagaaactttcatttgttacatatgggaaggaaaaacagagcaagctggtctggcgaaac
cagaacagccctggtgttgggtgtggcttccggaaaagattccgagaggaaggtacgtag
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integrated database retrieval system
