Oryza sativa japonica (Japanese rice) (RAPDB): Os02g0654400
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Entry
Os02g0654400 CDS
T02163
Name
(GenBank) Transcription initiation factor TFIID component TAF4 domain containing protein
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Os02g0654400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dosa03021
]
Os02g0654400
03036 Chromosome and associated proteins [BR:
dosa03036
]
Os02g0654400
Transcription machinery [BR:
dosa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
Os02g0654400
Coactivators
SAGA/TFTC/STAGA complex
Os02g0654400
Chromosome and associated proteins [BR:
dosa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
Os02g0654400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
Motif
Other DBs
NCBI-ProteinID:
BAF09525
RAP-DB:
Os02g0654400
UniProt:
A0A0P0VMB8
LinkDB
All DBs
Position
2
Genome browser
AA seq
728 aa
AA seq
DB search
MSTQLTEHDHQPEQEPPHSENHLKQAEPNSFQFAEKETGYAGLQNFTGPKVDVGQTSGEQ
QHVKQMVGQQAPPGAQDARKRGYQPSIPFNMLIPILQAHLDRDKDMQLQTVWAKLRRNEV
HKDDFLRVIRNIVGDQMLKQAAHKVFAQMQAQAQRSGQANANQQANANQYSLQSQVSSSG
SAQLHDQQVHVSTTPNQGQKNQALSSSQTFVQSGTQVQSSMTAHDNSIQRPDAKGMHVTP
NRPPVMNSAISAQTMNKQQQPTQVQQASQQIYGTTNRPDQPYTRPIGGSTPLSSLSSESE
IRPSSHPAKMEILPSHPMTQQNAAAQQMQQNKDVKTNASNPRSNAKQDSGTGKGRAVGTG
GSSTKSQGKQGPPNFSTPPAAKSNKKTAGQKKSLETSGSTPPPPSKKQKTSGTFQEQSFD
QLNDVTAVSGVNLREEEEQLLSAPKEESWASEEARKIAQEEDGKLFLQKGPLLKKLAAIV
PKCNLKSIGGDVEHCLSMCVEERLRRFISTLIRVSKQRIDTEKSGHQLVITSDVGRQILR
MNQKAKEEWDKKQAEETDKNKKQNEVDGGGTVELDKEKEETRSKNAKPNKEEDDKMRTTA
ANVAARQAVGGSDMLSKWQLMAEQARQKREGLDLAASSQRGTASRSHMAGKGPTDHHEAS
KRTHSAAFGTGGMNRQGRGPFAASHPKGPQRTISMKDVICVLEREPQMTKSRLIYRLYER
LPGDSTRD
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgtctacccaattaacggaacacgatcaccagccagaacaagaaccaccacattctgaa
aaccatctgaaacaggcagagccaaacagcttccagttcgctgaaaaggaaacaggctat
gctggtctacagaatttcacaggccccaaggtggatgtgggtcagacttcaggagagcag
cagcatgtaaaacagatggtcggtcagcaagcaccacctggtgcacaggacgcaaggaag
cggggataccaaccgtctataccatttaatatgttgattccaatcctacaggctcatctt
gacagagacaaggatatgcagcttcaaactgtgtgggcaaaacttaggcgtaatgaagtt
cataaagatgatttcttgagagttatcaggaacatcgttggagatcaaatgctaaagcaa
gcagcccataaagtttttgcacagatgcaagcccaggcacagagaagtggccaggcaaat
gcaaatcagcaggctaatgcaaatcagtattctttacaatcccaagtatcttccagcggt
tcagctcaattacatgatcagcaagttcacgtgtccaccacacctaatcagggccaaaaa
aaccaagcattgtcttcatcccaaacctttgtgcaatctggcactcaggtgcagagcagt
atgactgctcatgataattccatccaacggccagatgcaaagggaatgcatgttacgccg
aaccgacctcctgttatgaactcagcaatttctgcacaaacaatgaacaaacagcagcaa
cccacacaagtccagcaagcctcacagcaaatatatggaacaactaatcgccctgaccag
ccatacactaggccaatcggtggttcaacacctcttagctcactgagttcagaatcagaa
ataaggccttcctctcatcctgcaaaaatggagattcttccttctcatccaatgacacaa
caaaatgcagctgcgcagcaaatgcaacagaacaaggatgtgaagactaatgcttctaat
ccaaggagtaatgcaaagcaagattcggggacaggtaagggtcgtgcagttggcactgga
ggttcttcaacgaaatcgcaagggaagcagggcccccctaacttttccacacctcccgct
gcaaagagtaacaagaaaactgctgggcagaagaagtcattggaaacatcaggctctaca
ccaccccctcctagcaaaaagcagaagacttctggaaccttccaagaacaaagcttcgat
caactaaatgatgtcacggctgttagtggtgttaatcttagggaagaagaagaacagcta
ctctctgccccaaaggaagagagctgggcctcagaagaagcaaggaaaattgcacaggaa
gaagatggcaagctttttctgcagaaaggcccacttctgaagaaactagcagcaatcgtt
cctaaatgcaatttgaagagcattggtggtgatgttgagcattgtttatcaatgtgcgtg
gaggagcgattgcgaagatttatcagtactctcataagagtttcaaagcagagaattgac
acagaaaagtctggccatcaactagttataacatcagatgttggccggcaaattttgcgg
atgaaccagaaagctaaggaagaatgggataaaaaacaagcagaggaaacagacaagaac
aagaaacaaaatgaggttgacggcggtggcactgtggaattagacaaggaaaaggaggaa
actcgttcaaagaatgcaaagcccaacaaagaagaagatgacaagatgagaacaacagct
gcaaatgttgccgcccgacaggctgttggaggaagtgatatgctgtccaaatggcaactg
atggctgaacaagctagacagaaacgcgaaggccttgatctggctgcttcttcacagcgc
gggacagcttccaggtcgcatatggctgggaaaggtcccacagatcaccacgaagcttcg
aagaggacccattctgcagcgtttggaactggaggcatgaacaggcaaggcaggggtcca
tttgcagcgtctcatccaaaaggaccacaaagaactatttctatgaaggatgtaatatgt
gtcctcgagagggaacctcagatgacaaaatcgcggctgatatatcggctctatgagcgg
ttgcctggagattccaccagagattag
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integrated database retrieval system
