KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os02g0723300
Entry
Os02g0723300      CDS       T02163                                 
Name
(GenBank) HRDC-like domain containing protein
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03020  RNA polymerase
dosa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Os02g0723300
  09124 Replication and repair
   03420 Nucleotide excision repair
    Os02g0723300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dosa03021]
    Os02g0723300
   03400 DNA repair and recombination proteins [BR:dosa03400]
    Os02g0723300
Transcription machinery [BR:dosa03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     Os02g0723300
DNA repair and recombination proteins [BR:dosa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      Os02g0723300
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-ProteinID: BAF09885
RAP-DB: Os02g0723300
UniProt: Q0DY03
LinkDB
Position
2
AA seq 128 aa
IFYLVADMPPNSCILMNCEVAELLQEIHEHMAILSEDPKIKIPESFDKAFQYVKEGNQFS
TAQSVKQVLDPLRKYGVSDGEMCLIANVGPETIEEVYALVPSLKATRSLNESPIMEALTA
LADIKAAK
NT seq 387 nt   +upstreamnt  +downstreamnt
atcttctacctggttgcagatatgcctccaaactcttgcattttaatgaattgtgaagta
gcagaactattgcaagaaattcatgagcatatggctatcttatcagaggatccaaagatc
aaaattccagagtcatttgataaggctttccaatatgtgaaagaaggaaatcagttttcc
accgcacagtctgtgaaacaagtcctagaccctcttagaaaatatggtgttagtgatgga
gagatgtgcttgatagcgaacgttggacctgagaccattgaagaggtttatgcgctagta
ccatccctgaaggccactagatcactcaacgaaagtcccatcatggaggctctcactgcg
cttgctgacataaaagctgctaagtga

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