Oryza sativa japonica (Japanese rice) (RAPDB): Os02g0739000
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Entry
Os02g0739000 CDS
T02163
Name
(GenBank) DEAD/DEAH box helicase, N-terminal domain containing protein
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dosa03041
]
Os02g0739000
Enzymes [BR:
dosa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Os02g0739000
Spliceosome [BR:
dosa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
Os02g0739000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
AAA_22
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
BAF09979
RAP-DB:
Os02g0739000
UniProt:
A0A0P0VP79
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All DBs
Position
2
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AA seq
1179 aa
AA seq
DB search
MHCLAPHFLLFLPLSSASRHALPHTPPAPLLLPSHPAQAQAQARAGPLRLPSARSPSRAA
APVSDDDEDEEDDEEIDIRDDADVDEEYDDDDDEELDEESGGEEEEEEEGDDGVEELEEE
EGGREGTAARRRRSEEYKSQRVGKLVAEVREFGEDIIDYNELAGIYDFPIDKFQRLAIQA
FLRGSSVVVSAPTSSGKTLIAEAAAVATVARGRRLFYTTPLKALSNQKFRDFRNTFGDHN
VGLLTGDSAINKDAQILIMTTEILRNMLYQSVGMAASEGRLFQVDVIVLDEVHYLSDISR
GTVWEETVIYCPKEVQLICLSATVANPDELAGWIGQIHGKTELVTSHKRPVPLTWHFSKK
FALVPLLDGKGKKMNRKLRMSHFQNLSSPKSEFYYVKGKRKLRTTKNEQGNRSPLDISKQ
VQLSKHELTNMRRSQVPLIRDTLSQLWENDMLPAIWFIFSRRGCDAAVEYLEDCRLLHDC
EASEVELELKRFRMQYPDAIRESAVKGLLRGVAAHHAGCLPLWKSFIEELFQRGLVKVVF
ATETLAAGINMPARTSVISSLSKRIDAGRQLLTPNELFQMAGRAGRRGIDTVGHSVLVQT
TYEGPEECCDVIFAGLEPLVSQFTASYGMVLNLLAGSKVTHNQKESDDIKVKRSGRTLEE
ARKLVEQSFGNYVGSNVMVAAKEELERIQSEIQYLSSEITDESIDRKCREELSEEDYAEI
SLLQKKLKEEKQMRNELKKRMELERMVAWKTRLEEFESGHLPFMCLQYKDKDSVQHTIPA
VFIGSLSSFADQKIVSLVENDSPVAGKQKVDNEGQQYYPSYYVALSSDNSWYLFTEKWIK
AVYKTGLPAVPSAEGGPLPRETLKQLLLREDMMWDKIAKSEYGSLLCMDGSLDTWSWSLN
VPVLNSLSEDDEVERFSQEHQDAVECHKQQRKKVSQLKKTIRSTKGFKEFQKIIDMRNFT
KEKIERLEARSRRLTRRIRQIEPTGWKEFLQISKVIQEARALDINTQVIYPLGETAAAIR
GENELWLAMVLRNKVLLDLKPSQLAAICGSLVSEGIKLRPWKNSSYVYEPSSVVTGVINY
LEEQRNSLVDLQEKHSVKIPCEIDAQFAGMVEAWASGLTWREIMMDSAMDDGDLARLLRR
TIDLLAQIPKLPDIDPVLQKNAQIACNIMDRVPISELAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgcactgcctcgccccccacttcctcctcttcctcccactctcctccgcctcccgccac
gcgctcccccacaccccacccgctcctctcctcctcccctcccacccagcccaagcccaa
gcccaagcccgcgccggcccgctccgcctcccatccgcgcgctccccttcccgcgccgct
gcccccgtctccgacgacgacgaggacgaggaggatgacgaagagatagacatccgcgac
gacgcggacgtggacgaggagtacgacgacgacgacgacgaggagctggacgaggagagc
ggcggtgaggaggaggaggaggaggaaggggatgatggggtggaggagttggaggaggag
gagggtgggcgggaggggaccgctgcgcggaggcggcggtcggaggagtacaagtcgcag
cgggtggggaagctggtcgccgaggtgcgggagttcggggaggatatcatcgactacaac
gagctcgcggggatctacgacttccccattgacaagtttcagcgcttggctatacaagca
tttttgagaggctcatctgtcgtagtttctgcacctacaagtagtgggaagacactaatt
gcagaagctgcagctgttgcaacagtcgctagaggaagacgcctcttctacacaacaccg
ttaaaggccttatctaatcagaagttccgtgatttccggaatacgtttggtgatcataat
gttggtcttcttacaggagattctgctattaacaaagatgctcagatcctgataatgaca
acagagattctgcgtaacatgctgtatcaaagtgtcggtatggcagcatcagaaggtaga
ttatttcaagttgatgttattgttttggacgaagtccattacttaagtgacatttcacgt
ggcactgtttgggaagaaactgtgatatattgtccaaaggaagtccagcttatatgctta
tcagccactgttgcaaatcctgatgaattagctggctggattggtcagatccacggtaaa
acagagttggtgacatcacacaaacgaccagttccacttacttggcacttctcaaagaag
tttgcacttgtaccacttcttgatgggaaaggaaagaaaatgaataggaaattgcgaatg
tctcacttccagaacctatcttctccaaaaagtgaattctattatgtgaaaggaaagagg
aagcttagaacaactaaaaatgaacaaggtaacagaagccccttggacatctcaaaacag
gttcagttgtcaaagcatgagctcaccaatatgcgccggtctcaagttccattaatacgt
gatactttatcacaactttgggaaaatgacatgcttccagctatttggtttatttttagt
agaagagggtgtgatgcagctgttgaatatcttgaagattgtagacttctgcatgattgc
gaggctagtgaagttgagctggaacttaagaggttcaggatgcaataccctgatgctatc
cgggaaagtgctgtgaaaggactcttacgaggagttgctgcccatcatgctggttgcttg
ccactgtggaaatctttcattgaagaattatttcagcgtggccttgttaaagtagtcttt
gcaacagaaacccttgcagcagggattaacatgcctgctagaacatctgtgatttcttct
ctcagcaaaagaattgacgctgggcgccagctcttaaccccaaatgaattattccagatg
gcaggtcgtgctggacgaagagggattgatacagttgggcattctgttcttgttcagact
acttatgaagggcctgaagaatgttgcgatgttatctttgctggacttgagccacttgtt
tcacaatttactgcatcatatgggatggttttgaatctccttgctggctcaaaagttact
cataatcagaaagaatcggatgatattaaggttaagcgttctggaagaactttagaagaa
gctcgaaagttagttgagcaaagctttggtaactatgttgggagcaatgtaatggttgct
gctaaagaagagcttgaaagaatacagagtgaaatacaatatctctcttcagaaattaca
gatgaatccattgaccgaaagtgtagggaagaattatctgaggaagactatgctgagatt
tcccttcttcaaaagaaattgaaggaagagaagcagatgagaaatgaactgaaaaaaagg
atggaactagagagaatggtggcatggaaaactcggttggaagaatttgaaagtggtcac
cttcctttcatgtgcttgcagtacaaagacaaagattcagttcagcatactattcctgct
gttttcattggaagcctcagttcatttgcggatcaaaagattgtgagcttggtggaaaat
gattctcctgttgctggcaagcagaaagttgacaatgaaggacagcaatattacccatct
tattatgtagccttgagttcagacaactcatggtatctattcaccgaaaaatggattaaa
gctgtttacaagacaggtctacctgctgttccttcagcagagggaggccctctccctaga
gaaaccctgaagcagctccttttgcgtgaagatatgatgtgggataaaattgcaaaatca
gaatatggttctttgttatgcatggatggatctctggacacatggtcgtggagtctcaat
gttcccgtgcttaatagcctttcagaagatgatgaggtagaacgattctcccaggaacat
caagatgctgtagaatgtcataagcaacagagaaagaaagtttcacaattgaagaaaaca
atcaggagtactaagggtttcaaagaatttcaaaagatcatcgacatgagaaactttaca
aaagaaaagatcgagcgtttggaagctagatctcgtcgtttgactcggcggataagacaa
attgaaccaactggttggaaggaatttttgcagattagcaaagtcatacaagaggctaga
gcattagatatcaatactcaggtaatctatccgttgggtgagacggcagcagccatacga
ggggaaaacgagctctggcttgccatggttcttaggaacaaggtccttttggatctgaag
ccttctcaacttgcagcaatatgtggaagtttagtgtcagaagggatcaaacttcgtccc
tggaaaaacagcagttatgtatatgaaccatcttctgttgttactggtgttataaactac
ttagaagagcagagaaactcactcgtcgatctccaagagaagcacagtgtaaagataccc
tgcgaaatagatgcccagtttgctgggatggttgaagcctgggcatcagggttgacctgg
agggagataatgatggactcggcaatggatgatggagatttagcccgtctgctcagacgc
acgattgatttactagcccagattccaaaattgccagatatagatccggttctccaaaag
aacgcacaaattgcttgcaacatcatggaccgggtaccgataagtgagcttgctggctga
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