Oryza sativa japonica (Japanese rice) (RAPDB): Os02t0643200-01
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Entry
Os02t0643200-01 CDS
T02163
Symbol
Os02g0643200, YABBY4, YAB4
Name
(RAP-DB) YABBY protein family protein.
KO
K25796
plant-specific transcription factor YABBY family protein
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dosa03000
]
Os02t0643200-01 (Os02g0643200)
Transcription factors [BR:
dosa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Yabby
Os02t0643200-01 (Os02g0643200)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YABBY
HMG_box_2
HMG_box
Ccdc124
Mu-like_Com
Motif
Other DBs
RAP-DB:
Os02t0643200-01
LinkDB
All DBs
Position
chr02:complement(join(25842026..25842139,25841671..25841847,25841333..25841519,25840793..25840841,25840588..25840663,25840218..25840289,25839921..25840016))
AA seq
256 aa
AA seq
DB search
MSSSSSSSAVFPLDHLAAPSPTEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANL
LSVNLRGLLLPAPAPAPANQLHFGPSLLSPTSPHGLLDEVAFQTPSLLMEQAASASLSSI
TGRSSSSCASNAPAMQMPPAKPVQQEPELPKNAPASANRPPEKRQRVPSAYNRFIKDEIQ
RIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDQGFKKTFKPQDGSEDILLKDSLYAA
AAAAAAAAANMGVTPF
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcctcgtcctcgtcgtcggctgtcttcccactggaccacctcgcggcgccgtcc
cccaccgagcagctctgctacgtgcactgcaactgctgcgacaccatcctcgccgtcggc
gtgccgtgcagcagcctgttcaagacggtgacggtgcggtgcggccactgcgccaacctg
ctctccgtcaacctccgcggcctcctgctccctgcgccggcgccggcgccggccaaccag
ctccacttcggcccttccttgctctcccccacctccccccatggcctcttggacgaggtg
gcgttccagacgccgagcctactgatggagcaggccgcgagcgccagcctgagcagcatc
acgggccgcagcagcagcagctgcgccagcaacgcgccggcaatgcaaatgcctccggcg
aagcctgtgcagcaagagcctgagctgccaaagaacgccccggcgtccgcgaacaggcct
ccggagaagcgtcagagagtcccatctgcgtacaaccggttcatcaaggatgagatccag
cggatcaaggccggcaacccggacatcagccaccgggaggcgttcagtgcagccgcaaag
aattgggcccatttccctcacatccattttggcctcatgccggatcaggggttcaagaag
accttcaagcctcaggatggttctgaagacattcttctcaaggatagcctgtatgctgcg
gcagccgccgccgccgctgcagccgcaaacatgggcgtcactccgttctag
DBGET
integrated database retrieval system
