Oryza sativa japonica (Japanese rice) (RAPDB): Os02t0776400-01
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Entry
Os02t0776400-01 CDS
T02163
Symbol
Os02g0776400
Name
(RAP-DB) Similar to nuclear transcription factor Y subunit A-3.
KO
K08064
nuclear transcription factor Y, alpha
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dosa03000
]
Os02t0776400-01 (Os02g0776400)
Transcription factors [BR:
dosa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
Os02t0776400-01 (Os02g0776400)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CBFB_NFYA
Motif
Other DBs
RAP-DB:
Os02t0776400-01
LinkDB
All DBs
Position
chr02:complement(join(32798183..32798225,32795973..32796079,32795803..32795871,32795004..32795177,32794451..32794870))
AA seq
270 aa
AA seq
DB search
MLLPSSSSYSYASKGDSFRRTVDGPMRSTLTFDNNHSVVPSQNIDYGQPMACISYPYNDS
GSGVWASYSSRSVFHPQIVGGGTSPRVPLPSLEIADDGPIYVNPKQYHGILRRRQLRAKL
EAQNKLVKTRKPYLHESRHRHAMKRARGTGGRFLNTKQLQLQQQSHTTSTKTTTDSQNSS
GSVHLRLGGGAIGDQTPFPFKAMDSQANIKRAAASASTFTVTSAAQKDDAFFDRHGHHLS
SFSGHFGQASAQGGVGSMHNGSQQRVPAMR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcttctcccctcatcgtcttcttattcctacgcctccaaaggtgactccttcaggaga
actgttgatggtcctatgaggtcaacgttgacttttgataataatcattctgtagtgcca
agtcaaaacattgattacggccagccaatggcttgcatttcatacccatacaacgattct
ggttcaggagtttgggcatcctacagttcacgctcggtgttccatcctcaaattgtggga
ggaggcacatcgccaagagttcccttgccctccctggagatagcagatgatgggcccata
tatgtcaatcccaaacaatatcatggaattcttcgcagaagacaactgcgtgctaagtta
gaggcccagaataagctcgtcaaaacccgaaagccttaccttcacgaatctcggcatcgc
catgcaatgaagagggctaggggcactggtgggcgattcctgaataccaagcagctccag
ctgcagcaacagtctcacactacctccaccaagaccaccacagacagccaaaattcttca
ggttcagtccatctacggctaggtggtggcgcaatcggagatcaaactccatttccgttc
aaagcaatggattcacaagctaacatcaagagagctgcagcttctgcttccaccttcact
gtaacttctgcggcacagaaagacgacgccttcttcgaccgccatggccaccatctcagt
agcttctccggccattttggccaggcaagcgcacaaggtggcgtcggcagcatgcataac
gggtcacagcagagggttcctgctatgagatga
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integrated database retrieval system
