Oryza sativa japonica (Japanese rice) (RAPDB): Os03g0108200
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Entry
Os03g0108200 CDS
T02163
Name
(GenBank) WD40-like domain containing protein
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dosa04121
]
Os03g0108200
Enzymes [BR:
dosa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
Os03g0108200
Ubiquitin system [BR:
dosa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
Os03g0108200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
Sds3
WD40_2
WDR55
Beta-prop_EML_2
Motif
Other DBs
NCBI-ProteinID:
BAH91959
RAP-DB:
Os03g0108200
UniProt:
C7J0J0
LinkDB
All DBs
Position
3
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AA seq
524 aa
AA seq
DB search
MASRPRGRRLPPPHPPLIQEILDDDLFDVEVNYSDEEEEEEEEESDEEESESEDNEPEEV
VPGQESIGEGCGPAIQARVSGAAAEKNACPVCMEAWASQGAHRIWFRPKDITNLYAPEVA
VPNNDLEKEVLYLRGKAESLGETVMKHEKLIEEMNERLVELTSAQKRQILSEQRLMNVGS
SKRQKEFFMDGLRVMAIDAFNQTILASGKAPGIGQEHVLYKFSMVSHHEARNIQLPLDTK
TVRDICILPSGSAIFTSLGRKLSSFSMTADRVVLQCDLPCPGWSCSADESSRQICAGLQN
GNLIIFDIRQTSRPLHSMVGLSTHPVHTLHTVIDNNGSRKFLSASSIGPCMWDTDGIQGR
PKLLLGTDNQRVCISLACAPSSSDLLVASFRPKVETSEDATASQVYLSQTPTPSGGGKLG
YHSFIRRAGNSSSFTEDRTCSTLVSEIRMSKSAIIPYGNNQHLFAYGDESLRGVRTWRLP
SFEMHSDLSSLQQPVLDLRYAESSSGGRYLGYLSTEKLQVFRIR
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcgcccccgtggaaggcgccttcctcctcctcatccgccgctcatccaggag
atcctcgacgacgacctcttcgatgtagaggttaactacagcgacgaggaagaagaggag
gaggaggaggaaagcgatgaagaggagtcggagtcggaggacaacgaaccggaggaggtg
gtgccggggcaggagagtatcggggagggatgcgggccggccatacaagctagggtttcc
ggcgccgccgcggagaagaacgcctgccccgtttgtatggaggcctgggcctcccaaggc
gctcatcgaatctggttcagacctaaggacattaccaatctctatgcaccagaggttgca
gttccaaataatgatctggaaaaggaagtattgtatctaagggggaaagctgaatccctt
ggggaaacggtgatgaaacatgagaaattgatagaggagatgaatgagagattggttgag
ttgacaagtgctcagaagaggcagattctgtcagagcagagattaatgaacgttggtagc
tcaaagagacagaaagaattcttcatggatggacttcgagtcatggccatagatgcattt
aaccaaacaattcttgcttctggaaaagcaccaggcataggacaagaacatgttctttat
aagtttagcatggtttcccatcacgaagctcggaatatacaacttcctctggatactaaa
actgtcagggacatatgtatcttacctagtggctctgctatttttacatcactgggcagg
aaactatcgtcatttagcatgacggctgaccgtgtcgttcttcagtgtgatttgccgtgt
cctggctggtcatgttctgcggatgaatcttcgcgtcagatttgtgctggattgcagaat
ggcaatcttatcatctttgatatccgtcaaacctcaagaccgttgcattctatggtgggt
ttatctacacacccggttcatactctccatacggtcattgataacaacggttctagaaag
tttctctctgcctcttctataggcccctgcatgtgggatactgatggtattcaaggcagg
ccaaagttgctattggggacagataatcaacgggtgtgcatttctcttgcatgtgcccct
tcatcaagtgatctattggtagcttcctttcggccaaaggttgaaacgtccgaggatgct
acagcatctcaagtgtatctatcacaaacaccaacaccctctggtggagggaaattaggg
tatcattccttcatcaggagggcggggaactcgtcatccttcaccgaagataggacatgc
agcacacttgtgagcgaaattcgcatgtcgaaatccgcaattataccttatggaaacaac
caacatctgtttgcttatggagatgagtcgctgcgtggggtccggacctggcgactacca
tcgtttgagatgcattctgatctcagctccctccagcaaccggtcctggatctaaggtat
gcagaaagttcatccggagggaggtatctcgggtacctgagcacggaaaagttgcaggtt
ttcagaattaggtag
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