Oryza sativa japonica (Japanese rice) (RAPDB): Os03g0151700
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Entry
Os03g0151700 CDS
T02163
Name
(GenBank) Similar to WD repeat protein (Fragment)
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Os03g0151700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dosa03009
]
Os03g0151700
Ribosome biogenesis [BR:
dosa03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
Os03g0151700
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WDR55
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Utp12
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
DSE1_N
WD40_MABP1-WDR62_1st
NBCH_WD40
ASA1
CFAP251_N
Beta-prop_NOL10_N
Beta-prop_WDR41
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_VPS8
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_SPT8
Beta-prop_NWD2_C
Beta-prop_NUP159_NUP214
Beta-prop_WDR19_1st
Beta-prop_ACSF4
PAC11
Beta-prop_HPS5
WD40_like
KNTC1_N
Beta-prop_LRRK2
Beta-prop_EIPR1
Utp8_b_propeller
RMC1_N
WD_LRWD1
WDR54
Beta-prop_MIP2
PROPPIN
AAR2_1st
Motif
Other DBs
NCBI-ProteinID:
BAF10900
RAP-DB:
Os03g0151700
UniProt:
Q10RP1
Q0DV38
LinkDB
All DBs
Position
3
Genome browser
AA seq
940 aa
AA seq
DB search
MVKAYLRYEPAISFGVVASPESNVAYDPSGRLLLAAALDRFAAWDLKRGLPSLSFATAAP
SPSLAVSCLATFPSAASASASSIASGHADGSIRLWDTETGSCEATLHGHRSAASALVFGP
SGAIIASGSKDCDIILWDVVGQAGLYRLRGHRDQVTGLVFLDSGKKLVSCSKDKLIRVWD
LDTQHCLQIVGGHRSEIWSIDVDPSERFLVSGSADQELRVFTVRKSAEEGEDWSKWDMLK
LFGEIPRQSKERVATVKFNKNGNLVACQVAGKTVDIYRVLDETEAARKAKRRMHRKKEKA
LAKSMAAEGNGTVIDPLSAQDLQNPTPVVTDIFKLLHVLRVNKKICSVAFSPNNPPKGCL
ATLSLSLNNNMLETYSVDNENVSNMYSIEMHGHRSDIRSLALNSEDNLLMSTSHNAVKIW
NPSTGDCLRTIDSDYGLCSAFVPGNRYALVGTKSGTLEIIDINSGSSIEVIEAHAGSIRS
IVLIPNEDGTAGAWGFVTGSADHDVKFWEYQLMQKSDNDSKQLSVTNVKTLKMNDDVLAV
TISPTGNHIAVALLDGAVKVFTMDSLKFALTLYGHKLPVLCMDISSDGVLIVTGSADKNL
KIWGMDFGDCHKSIFAHTDSVMDVKFVSKTHYMFSVGKDRTVKYWDADKFELLLTLEGHH
AEVWCLAISSRGDFIVTGSHDRSIRRWDRTEEQLFIEEEQEKRLEETFEADLDSAMDHKY
GQKDGAPDEGSVGVPGRKTKETVTAADAIIDALDTAEEEVKRLDQHQEGQNNGNGTTFQP
NVIMQGQSPSDYVLNVVSNVRPNDLEQALLSLPFSDALKIMSYLKEWSMVPLKVELVCRV
CLVLLQTHHSQLTTTPSARSILTELKGILYSRVKECKDAIGFNLAAMDHIKELLAMRSDA
PFRDARAKLMEIRQEQSRRSDRSDGAEKRKKKKRRTSGES
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggcctacctccggtacgagccggcgatctccttcggcgtggtcgcctccccg
gagtccaacgtcgcgtacgacccctccggccgcctcctcctcgccgccgccctcgaccgc
ttcgccgcctgggacctcaagcgcggcctcccctccctctccttcgccaccgccgccccg
tccccctccctcgccgtctcctgcctcgccaccttcccctccgccgcctccgcctccgcc
tcctcgattgcgagtgggcacgccgatgggagcatcaggctatgggacacggagaccggc
tcctgtgaggcgaccctccatggccaccgctctgcggcttccgccctcgtattcggcccc
tctggcgccatcatcgcctctggcagtaaggactgtgacattatcctttgggatgtagtt
ggacaggccggcctttatcgactccgtggccaccgtgatcaggtcacgggtttggtgttt
ctggattcagggaagaaactagtgagctgctccaaggataagttaatccgggtttgggac
cttgacacgcagcactgccttcagattgttggtggccaccgcagtgaaatatggtcaatt
gatgtggatcccagcgagaggtttttggtgtctgggtcggccgatcaagagctgcgggtg
tttacggtccggaaatctgctgaggagggtgaggattggagcaagtgggatatgctgaag
ctatttggtgagattccaaggcaaagcaaggaaagggtagcgactgttaagttcaataag
aacggtaatcttgtggcatgccaggtggctgggaagacggtggatatttatagggttctt
gatgaaacagaggcagcacggaaggccaagaggaggatgcacagaaagaaggagaaggct
ttggccaaatccatggctgctgaagggaatggtactgttatagatcctttgtcggctcaa
gacttgcagaatcccactcctgttgtcaccgatatatttaagcttctccatgttttgcgg
gttaacaagaaaatttgctctgtcgcattttctccaaacaatccaccaaaaggttgcctt
gccaccttgtctctatctctgaataataacatgcttgagacatactcagtggataatgag
aatgtgtcgaatatgtattccattgagatgcatggacaccgttctgatattaggagtctt
gcacttaactcagaggacaacctcctgatgtcaacaagtcacaatgctgttaagatatgg
aatcctagtactggcgactgtctccggacaattgattctgattatggattgtgcagtgca
tttgttcctggaaatcggtatgcccttgtaggcacaaagagtggtactttggagattata
gatattaatagtggaagctctattgaggttatagaagctcatgctggttccatacgatca
attgtactcattccaaacgaggatggaactgctggtgcatggggttttgtcactggaagt
gctgatcatgatgtcaagttctgggaataccaattgatgcagaaatctgataatgactct
aagcagctgagcgtaacaaatgtcaaaactttgaaaatgaatgacgatgtccttgcagta
accatcagtccaactgggaatcatattgctgttgctctcttggatggcgcagtcaaggtc
ttcactatggactcactgaagtttgcccttaccctttatggccacaaacttccagttctc
tgcatggatatatcatccgatggagttctaatagttactggttctgcagacaaaaatttg
aaaatttggggtatggattttggtgactgccataagtctatatttgcccacacggacagt
gtgatggatgttaagtttgtttctaaaacacattatatgttcagtgttgggaaagaccgc
actgtaaagtactgggatgctgataaattcgagttgttgttaacactggaaggacaccat
gctgaagtttggtgtcttgccatcagcagtcgtggtgattttattgtaacaggttctcat
gaccgctctattcggcgttgggatcgtactgaagaacaactcttcattgaggaagagcaa
gagaaaaggttggaggaaactttcgaggctgatttagatagtgctatggaccacaagtat
gggcaaaaagatggtgctcctgatgagggttctgtaggtgttcctggtaggaaaaccaaa
gagacagtaactgctgctgatgcaattattgatgcacttgacactgccgaggaagaagta
aaacgccttgatcagcaccaggaaggacaaaataatgggaatggaactacatttcaaccc
aatgttataatgcaagggcagtcaccatcggattatgttttgaatgtagtttcaaatgtt
cgtccaaatgacttggaacaggctctcctttcattgccattctcagatgcacttaagatc
atgtcttacttaaaggagtggtctatggttcctttgaaggttgagcttgtttgtagggtt
tgcctagtgctgcttcaaacacaccacagccaattaactacgacaccatctgcaagatcg
atacttacagaactgaaaggcattctttacagtagagtaaaggaatgcaaggatgctata
ggtttcaaccttgctgcaatggatcatataaaagaattgttggccatgagatcagatgct
cccttccgagatgcaagagcgaagctgatggagatcaggcaggaacaatcaagacgatcg
gataggtcagatggggctgaaaaaaggaaaaagaaaaagcgaagaacatccggtgagagc
tga
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