Oryza sativa japonica (Japanese rice) (RAPDB): Os03g0151800
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Entry
Os03g0151800 CDS
T02163
Name
(GenBank) Similar to Cell division control protein 48 homolog A (AtCDC48a)
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Os03g0151800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dosa03019
]
Os03g0151800
03009 Ribosome biogenesis [BR:
dosa03009
]
Os03g0151800
04131 Membrane trafficking [BR:
dosa04131
]
Os03g0151800
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dosa04147
]
Os03g0151800
Messenger RNA biogenesis [BR:
dosa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Os03g0151800
Ribosome biogenesis [BR:
dosa03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Os03g0151800
Membrane trafficking [BR:
dosa04131
]
SNARE
SNARE associated proteins
Others
Os03g0151800
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Os03g0151800
Exosome [BR:
dosa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Os03g0151800
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
AAA_5
AAA_33
AAA_22
CDC48_2
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
AAA_28
Mg_chelatase
nSTAND_NTPase5
ATPase_2
Parvo_NS1
AAA_18
AAA_lid_PRS2_C
ABC_tran
Viral_helicase1
Vps4_C
NB-ARC
AAA_7
NACHT
TsaE
IstB_IS21
DUF815
ResIII
Zeta_toxin
AAA_24
Zot
Motif
Other DBs
NCBI-ProteinID:
BAF10901
RAP-DB:
Os03g0151800
UniProt:
B7EN96
LinkDB
All DBs
Position
3:complement(2830631..2835017)
Genome browser
AA seq
809 aa
AA seq
DB search
MASQGEPSSSSDPKGKKDFSTAILERKKSPNRLVVDEATNDDNSVIGMHPDTMEKLQLFR
GDTVLLKGKKRKDTICIVLADDTCEEPKIRMNKVVRKNLRVRLGDVVSVHQCPDVKYGKR
VHILPIDDTVEGITGNLFDAFLKPYFLEAYRPLRKGDLFLVRGGMRSVEFKVIETDPAEY
CIVAPDTEIFCDGEPIKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIG
VKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAE
KNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKARSHVIVMGATNRPNSID
PALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLEHIAKDTHGYVGADLAAL
CTEAALQCIREKMDIIDLEDETIDAEILNSMAVTNDHFKTALGTSNPSALRETVVEVPNV
SWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE
CQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAG
GAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDDQSRL
QIFKACLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKDIEMEKRRK
DNPEAMEEDEVDDIAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRF
ADQPASGAGAAADPFASAAAAADDDDLYS
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggcgagccagggagagccctcctcctcctccgatccgaaggggaagaaggatttctcg
acggcgatcctcgagaggaagaagtcgccgaaccggctggtggtcgacgaggccaccaac
gatgataactccgtcatcgggatgcaccccgacaccatggagaagctccagcttttccgc
ggcgacactgtgctgctcaagggtaagaagagaaaagacaccatctgcattgttcttgct
gatgacacctgcgaggagccgaagatcagaatgaacaaggttgtcaggaagaacctgaga
gtacgacttggtgatgtcgtgtctgttcatcaatgcccagatgtcaaatacggcaagcgt
gtgcacatacttccaattgatgatactgttgagggcatcaccggaaacttgtttgatgcc
ttcctgaaaccgtacttccttgaagcataccgtcctttgaggaaaggagaccttttcctt
gttaggggtgggatgagaagtgttgaattcaaagttatagagactgaccctgcagagtac
tgcattgttgcacctgatacggagatattctgtgatggtgagcctattaagagggaggat
gaggaaagacttgatgaagttggttacgatgatgttggtggagttaggaagcagatggcc
caaatcagagaacttgttgagctcccattgcgccatccccaacttttcaagtctattggt
gtgaagcctccaaagggcatactgctttatggaccccctggctctggaaagaccctcatt
gctagagctgttgctaatgaaacaggtgctttcttctttctgattaatggcccggagatt
atgtcaaagctagcaggagaaagtgagagtaatctcaggaaggcatttgaagaagctgag
aagaatgcaccatcaatcattttcatcgatgagatagactccatagcaccaaagagagag
aagacccatggagaagttgagaggcgcatcgtttcacagctgttgactcttatggatggg
ctcaaagctcgttcccatgtcattgtcatgggtgctacaaaccggccaaacagtattgat
cctgctctcagaaggtttggtaggttcgatcgggagattgacattggtgttcctgatgaa
gttgggcggcttgaagttcttcggattcacaccaaaaacatgaagctggctgaagatgtt
gacctggaacacattgccaaagacactcatgggtatgtgggtgctgatcttgctgctctt
tgcactgaggctgctctccaatgcatccgtgagaagatggatattatagatcttgaggat
gagaccatagatgctgagatacttaactcgatggctgttacaaatgatcacttcaagact
gcactagggacaagcaacccgtctgctctccgtgaaactgttgttgaagttccaaatgtc
tcttgggaggatattggtggactggagaatgtcaaacgggagctgcaggagactgtccaa
tatccagtggagcatcctgagaaatttgagaagtttggcatgtctccgtccaaaggtgtt
ctgttctatggccctcctggctgtggtaagactttgttggccaaggcaattgctaacgag
tgccaggctaacttcattagtgtcaagggacctgagctgcttaccatgtggtttggtgag
agtgaggccaatgtgcgtgagatttttgacaaggctaggcagtcagctccttgtgtcctc
ttctttgatgagcttgactcaattgctacccagagaggaagcagtgttggtgatgccgga
ggtgctgctgatagagtgctgaaccagttgttgactgagatggacggcatgaacgcgaag
aaaaccgtgttcattattggtgctactaacaggccagatatcattgaccctgccttgcta
aggccagggcgtcttgatcagcttatctacattcctctgcctgatgatcaatctaggctg
cagatcttcaaagcttgcctccggaagtcacctgtggccaaggatgtagacctgaatgct
cttgccaaatacacccaaggtttcagtggtgctgatattacagaaatctgccagcgtgca
tgcaaatacgccatcagagagaacattgaaaaggacatcgagatggagaagcggaggaag
gacaaccctgaagccatggaggaggacgaggttgatgatattgctgagatcaaggcggct
cacttcgaggagtcgatgaagtacgcacgccggagtgtgagtgacgccgacatccgcaag
taccaggccttcgcccagactctgcagcagtctcgtgggttcggcaccgagtttaggttc
gctgaccagccagcgtctggcgccggcgccgccgctgaccccttcgcatccgctgccgcc
gcagctgacgatgatgatttatatagttag
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