Oryza sativa japonica (Japanese rice) (RAPDB): Os03g0165266
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Entry
Os03g0165266 CDS
T02163
Name
(GenBank) DEAD/DEAH box helicase, N-terminal domain containing protein
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Os03g0165266
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dosa03400
]
Os03g0165266
DNA repair and recombination proteins [BR:
dosa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
Os03g0165266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Helicase_C_2
PAS_12
Motif
Other DBs
NCBI-ProteinID:
BAH92007
RAP-DB:
Os03g0165266
UniProt:
C7J0A3
LinkDB
All DBs
Position
3
Genome browser
AA seq
1078 aa
AA seq
DB search
MEEAQAKQVAAQQELQQQEAMANKRKVAEAQDDREHKRQELDHHEHNTFTRMKPRCLPHI
ASMPSEPARRSRSFSRDSAGECLALSPARPASAVSPADEESEREAAKLDHQPVAISSRKH
PGSDSRKVLQIPLSLRGGGGEIDHSTQKEARMDSDSCKRRKHESGHDSSSRVQSQSSILS
RNRILCHQLLEQCDDLKYGSSTNDYKAISMKRLELISILQKLQEVPIQLPYASPLKSSET
NRLVQDGRNSSCRNIIDLDSDNDEDYTFANVDNIGANTTVVLVDSDDGDSVASFVDEKSS
DSKQNANYIEESVLPEQHAQQQEISMLDNENISSEAQAVKKGKDSMDINDVIYNKSGHEE
IGEEEAQAENVQIKGNLKKEIISVASDELACEVMRSQSPTNGNFDQYDNSSPVDELEGLW
MDMYLAMACSKTVGSDHNIVPSENSCEQAEDECQHDFLMKDDLGIVCRVCGLIQQRIENI
FEYQWKKRKQSYRARPSEHRNSSDADAIDKTSGAILEVVPDALCLHPQHSQHMKPHQVEG
FNFLVKNLADENNPGGCILAHAPGSGKTFLIISFVHSFLAKYPAGRPLIILPKGILSTWR
TEFLHWQVDDIPLYDFYSSKADKRSEQLKVLNLWEESRSILLLGYQQFACIVSDHTSDTE
AIMCQEKLLKVPSLVILDEGHTPRNEETDLLTSLENIRTPRKVVLSGTLFQNHVREVFNI
LKLVRSKFLKMDKSRAIVNCILSKVDLMGKSARSKNISDKDFFDLVQEHLQKDGNDKMRA
VIIQNLRELTADVLHYYQGKLLDELPGIVDFTVFLNMSSKQEHIIKGLDGINKFAKRSRC
NAVSLHPCLKNANKADADDGNVTNRKIGSIISGIDINDGVKAKFVHNLLSLSEATGGKVL
VFSQYVRSLIFLEKLVSRMKGWKSEVHIFRVTGGSTQDQREQAVHRFNNSPDARVFFGSI
KACGEGISLVGASRIVILDVHENPSVMRQAIGRAYRPGQSKMVYCYRLVAADSPEEDDHH
TAFKKERVSKLWFEWNELCSSDDFELATVDVSDSEDRFLESSALKQDIKALLKSCNSQ
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggcgcaggcgaaacaggtggccgcgcagcaggagctgcagcagcaggaggcc
atggcgaacaaacgtaaggtggccgaggcccaagacgaccgagaacacaagaggcaggaa
cttgaccaccacgaacacaatactttcacgcgcatgaagccgcgttgcttgccgcatatt
gcttctatgccatctgaaccggcgagacgctcgagaagcttttcacgcgactccgccgga
gagtgcctggctctctcgccggcgcggccggcatcggcggtgtctcctgccgacgaggag
tcggagagagaggcggcgaagttggaccaccagccggtcgccatatcctctcgaaagcac
cctggaagcgattctcgcaaggttcttcagattcctctgtccctccgagggggaggagga
gagatcgatcactcaacccagaaggaagctaggatggattctgatagctgcaaaaggcgg
aagcatgaaagcggtcacgatagctcttcacgggtccagtcccagtcaagcatccttagt
cgtaacagaattttgtgtcatcagttgcttgaacaatgcgatgacttgaagtatgggagc
tccacgaatgattacaaggcaatcagtatgaagcggcttgaacttatcagcatcctacaa
aagctgcaagaagtacctatccagttgccatatgccagtccactcaagtcatcagaaaca
aatcgccttgtgcaagatggaagaaactctagttgtcgtaatataattgacttggattca
gacaatgatgaagattatacttttgctaatgtggacaatattggtgctaacacaacagtt
gttttagttgattctgatgacggggacagtgttgcatcctttgtagatgaaaaatcatct
gattccaagcaaaatgcgaattatattgaagaaagcgttctgcctgagcagcatgcccaa
caacaggaaatctccatgctggataatgaaaacatcagttctgaagcacaagcagttaag
aaaggaaaggatagtatggacatcaacgatgttatttacaacaagagtggtcatgaggag
ataggggaagaggaagcacaagctgaaaatgtccagataaaagggaacttaaagaaagag
atcatctctgttgcttctgatgaactagcttgtgaagttatgcgcagtcagtcaccaacc
aatggaaattttgatcaatatgacaacagcagcccagttgatgagctggaaggactttgg
atggacatgtaccttgcaatggcatgttcaaagactgttggaagcgatcataacattgtc
ccatcagagaattcttgtgaacaagcagaggatgaatgccagcacgatttcctgatgaaa
gatgatttgggcattgtctgtcgtgtttgtggtctgatccagcaacgtattgaaaatatt
tttgagtaccagtggaaaaagcggaagcaatcgtacagagcacgtccctcagaacacaga
aattctagtgatgcagatgcaattgacaaaacttcaggagctattctcgaagtggtccct
gatgctctatgcctccaccctcaacattcacagcatatgaaacctcaccaagtggaaggt
ttcaatttcctggtcaagaacttggcagatgagaacaaccctggtggctgtattctggca
catgcaccaggttctgggaagacttttttgataattagttttgtccacagcttcctagcc
aaataccctgctggaaggccattgattattctcccaaagggaattctatcaacatggaga
accgaatttcttcattggcaagttgatgatattcctttgtatgacttctactcctccaaa
gctgacaaacggtctgaacaactcaaagttttgaacttgtgggaggagagcagaagtatc
ctgttgttgggctatcaacagtttgcatgcatagtttctgatcacacttctgatacagaa
gccatcatgtgccaggagaagttactgaaggtcccgagccttgtcattctagatgaagga
cacactccaagaaacgaggaaacagacttgctcacttcactggaaaacatccgaactcct
cgtaaagtagtcctctcaggaaccttgttccagaaccatgtgagggaggttttcaacatt
ttgaaacttgtccgatccaaattcttgaagatggacaaatctcgtgctattgttaactgc
atactaagcaaggtggacttgatggggaagagtgcacgatcaaagaatatctcagataag
gacttctttgatttggttcaagaacaccttcagaaagatggaaatgacaagatgagagcg
gtgattatccaaaatcttcgtgagctaactgcagatgtgcttcactattaccaaggcaag
cttttggatgagctacctggaattgtggactttacagtttttctcaatatgagtagcaaa
caggaacatattattaagggcttggatggaataaataaatttgcgaaacgctcgagatgc
aatgccgtttctcttcatccatgcttgaagaatgccaataaagctgatgcagatgatgga
aatgtcaccaataggaagatcggttccatcatatccggaattgatatcaacgacggggtg
aaggccaagtttgtacacaatctgttgtctctttcagaagccacgggagggaaggtactc
gtgttcagccagtatgtgcgctctttgattttcttggaaaagctggtcagtagaatgaaa
ggatggaaatcagaggtacatattttcagggttactggtggctcaactcaggatcagcgt
gagcaagcagtccatagattcaacaactcaccagatgctagagtcttctttggctccatc
aaggcatgtggcgagggcatctccctcgttggcgcgtctcgtatagtgatcttggatgtc
catgagaacccttcagtgatgcgccaggcgattggccgtgcctataggccaggacagtct
aaaatggtgtattgctaccgcctcgtcgctgctgattcgcctgaggaggatgatcaccac
accgccttcaagaaagaacgagtgtcgaagctgtggttcgagtggaatgagctctgcagc
agtgatgattttgagctcgcaacggtggatgtttcagatagcgaggacaggttccttgaa
agctctgcattgaaacaagatatcaaagccctattaaaaagctgcaattcacagtaa
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