Oryza sativa japonica (Japanese rice) (RAPDB): Os03g0216800
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Entry
Os03g0216800 CDS
T02163
Name
(GenBank) Similar to Polygalacturonase B (Fragment)
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00040
Pentose and glucuronate interconversions
dosa01100
Metabolic pathways
Module
dosa_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Os03g0216800
Enzymes [BR:
dosa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
Os03g0216800
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-ProteinID:
BAF11301
RAP-DB:
Os03g0216800
UniProt:
Q10PY4
Q0DTY7
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Position
3
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AA seq
438 aa
AA seq
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MGPRKLHLASISALSIFLYVFAHTNSAQAFPVADGTYPPEAEGPAAESSDMDEQLELTPG
PQPRVVDVDDYRARADAGDHTEAFLQAWKEACNSSDYPSVLLVPEGKTYLLMPVSFNGPC
RATTITATIRGTLEAPSNRSVWLDRDLQEWITFDNIDHLRVLGGGTLNGNGHQWWINSCK
TNRSMRCVTGPTALYFRRCNHLVVEGLQIRDSMQMHVVIAYSWRVLVSRLLITAPGWSPN
TDGIHVSNSREVLMSGCIISTGDDCISIVTGSMFIRATGIFCGPGHGISIGSLGANKSWA
HVSDVLVEKATLVGTTNGVRIKTWQGGDGHAERITFQDITMHNVTNPVIIDQNYCDSMTP
CHEQGSAVAINNIRYRNIRGTSSSKVAINFVCSNSVHCDGIVMQDVSLVGEGSYVSCSYM
NARVVELGYNFPYCRAEM
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgggtcccaggaagcttcatctggcctccatttctgccctatcaatctttctctacgtg
tttgctcacaccaattcagcacaagccttccccgtcgctgacggcacgtaccctcctgaa
gctgaaggcccagcagcagaaagttcagacatggacgagcagctggagctcacccctgga
ccgcagccgagggtcgtcgacgtcgacgactacagagcgagagccgacgccggcgaccac
acggaggcgtttcttcaggcctggaaggaggcctgcaactcctccgattacccatccgtg
ctcctcgtgccggaggggaagacatacctcctgatgcctgtaagcttcaatggcccctgc
agagccaccacgatcactgcaacgataagggggacgctggaggctccatcgaatcgatcg
gtttggctcgatcgcgatctgcaggaatggatcacgttcgacaacatcgatcacctccgt
gtcctcggcggcgggacgctcaatggcaatggacaccaatggtggatcaactcttgcaag
accaacagatccatgagatgcgtcaccggcccaacggcgctgtacttcaggaggtgcaac
catctggtcgtggagggcctccagatcagggacagcatgcagatgcacgtcgtgatcgcc
tactcctggagagtgctggtctcgaggctgctcatcacggcgccaggatggagccccaac
accgacggcatccacgtatccaacagcagggaagtgttgatgagtggctgcatcatcagc
acaggtgatgactgcatatcaattgtgaccggctctatgtttatacgggcaactgggata
ttttgtggaccaggccatggcataagcattggtagtctaggagcaaacaaatcatgggcc
catgtttccgacgtgctggtggagaaagctacactggtgggcactaccaacggtgtgcgg
atcaaaacttggcagggaggagatggccatgcagaaaggattacctttcaagatataaca
atgcacaacgtcactaacccggtgattatcgatcagaattactgtgactccatgacacca
tgtcatgaacagggatcagctgtcgccataaataacatacgctacaggaacatacgtgga
actagttcttcaaaagtcgccatcaacttcgtctgcagcaactctgtccattgtgatggc
atagtgatgcaggatgtttctttggttggagaaggatcctacgtttcttgttcgtacatg
aatgctagagtggtagagttggggtataacttcccgtattgcagagcggaaatgtag
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