Oryza sativa japonica (Japanese rice) (RAPDB): Os03g0246800
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Entry
Os03g0246800 CDS
T02163
Name
(GenBank) Similar to Sec7p-like protein (Fragment)
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
Os03g0246800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dosa04131
]
Os03g0246800
Membrane trafficking [BR:
dosa04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
Os03g0246800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
BIG2_C
Sec7-like_HDS
DCB
Mon2_C
Phage_TAC_15
Motif
Other DBs
NCBI-ProteinID:
BAF11459
RAP-DB:
Os03g0246800
UniProt:
Q0DTH9
LinkDB
All DBs
Position
3
Genome browser
AA seq
1789 aa
AA seq
DB search
MASPAAAPPPTPPESDPRLVEAFVPFLEKLIKNASWRNKAHSKLSHTAKSILDRLQNPPP
PAAAAQAPSTPTSPTTPTSSSSQPGPLRSLSLADSELLLGPINSALGSGSAKLAEAGLEL
LHRLIAHSYIHGEADPSADPSAQLVASLLDAACNALHLDDEHIELLLLKTLLSAVTSTSV
RLHGDCLLRAVRACYDMYLGSRSVVNQATAKASLVQMLVIVFRRMEADSSTVPVQPIVVA
DVIELPEAASGASPAADANFVQGFISKIIGDIDGAITPLARTTSSAAAGAGGAAAHDGAF
ETRAAEEGAHPADLLDSTDKDMLDAKYWEINMYKSALEGRKDEIGVEGAVVGALDDDADV
RIGNKLRRDAFLVFRALCKLSMKTPPKDAPADPIVMRGKILALELLKILLENAGAVFRTS
ERFLGAIKQYLCLSLLKNCASAHMIVFQLSCSIFISLVSRFRPGLKAEIGVFFPMIILRV
LENIAQPNYQAKLIVLRFLEKLCADSQILVDIFLNYDCDVHSSNIFERMVNGLLKTAQGP
PAGVSTTLVPPQDTTMKSEAMKCLVAILRSMGDWMNKQLRIPDPDSPKVESEQNDNDGGH
EISHTEDNGDECSEASDSHSEMSNGVSEAASLEQRRAYKMELQEGISLFNRKPRKGIEFL
INANKVGESPEEIAAFLKSSSGLNKTMIGDYLGEREDLSLKVMHSYVDSFDFQGMEFDEA
IRAFLQGFRLPGEAQKIDRIMEKFAERYCKCNPKAFSSADTAYVLAYSVIMLNTDAHNPM
VKNKMSPEDFIRNNRGIDDGKDLPEEFMRSLYERIWKKEIKMKEEEFVPQQQKSTSSNKI
LGLDNILNIVVRKRDSRMETSDDLIKHMQEQFKEKARMSESVFYPATDVVVLKFMVEVCW
APMLAAFSVPLDQSDDEIVISQCLEGFRSAIHVTAAMSMKTQRDAFVTSLAKFTSLHSAA
DIKQKNIEAIKAILLIADEDGNYLQEAWEHILTCVSRFENLHLVGEGAPPDATFFALQQP
DLDKSKQAKSSILPVLKKKSPNTVPASKRGSYDSAGVGGKASGVDQMNNVVTSLLEQVDM
AEMNRVFVRSQKLNSEGIIDFVKALCKVSMEELRSASDPRVFSLTKIVEIAHYNMNRIRL
VWSSIWHVLSDFFVTIGCSENLSIAIFAMDSLRQLAMKFLEREELANYNFQNEFMKPFVV
VMRKSRAVEIRELIIRCVSQMVLARVSHVKSGWKSMFMVFATASYDDHKNIVLLAFEIIE
KILREYFPYITETESTTFTDCVNCLIAFTNSRFNKDISLNAIGFLRFCAAKLAEGDIGSS
SRLKENPPSPRLTKDGKQESAVLVDKDDTIHFWFPLLAGLSELTFDLRPEIRKSALQVLF
DTLRNHGHLFSLPLWEKVFDSVLFPIFDYVRHAIDPSSGSPQGQNVESDPSELDQDAWMY
ETCTLALQLVVDLFVKFYDTVNPLLRKILLLLTSFIKRPHQSLAGIGIAAFVRLMSSAGS
VFVDEKWLEVVLSLKEAATETLPDFSYIASGAYLENVPIENGGSSEKTEDESRPLEDGTG
EASRSRNLYFAIGDAKCRAAVQLLLIQAVMEIYNMYRARLSSQNTVILFEALHTVATHAH
KINSDNDLRSKLQELGSMTQMQDPPLLRLENESYQLCLTILQNICLDRSPNERSVEVESH
LVGLCKEVLEVYLSTANPSQLSGAPQPLGHWLIPVGSSKRRELAARAPLVVSTLQAISGL
GDSSFEKNLGQFFPLLAGLISCEHGSSEVQVALSDMFSTWVGPVVLQTC
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atggcttccccggcggcggcgccgccgcctaccccgccggagtccgacccgcggctcgtg
gaggccttcgtgcccttcctcgagaagctcatcaaaaacgcctcgtggcgcaacaaggcg
cactccaagctctcccacactgccaagtccatcctcgaccgcctccagaacccgccgccg
ccggcggctgcggcgcaggcaccgtccacgcccacctcccccacgacgcccacctcgtcg
tcctcgcagccgggcccgctccgcagcctctcgctcgcggactcggagctgctgctcggc
ccgatcaactccgcgctcggctccggcagcgccaagctcgccgaggccgggctcgagctg
ctccacaggctgatcgcgcactcctacatccatggcgaggccgacccgtccgccgacccc
tcggcccagctcgtcgcgtccctcctcgatgccgcctgcaacgcgcttcacctcgacgac
gagcacatcgagctcctcctactcaagacgctcctctcggcggtcacctccacgtcggtg
cgcctccatggagattgcctgcttcgcgccgtgcgcgcttgctatgatatgtacctggga
agccgcagcgtggtgaaccaggccactgccaaggcgtcactcgtgcaaatgttggtgatc
gttttccgccgcatggaggcagactcctccacagtgcccgtgcaacccatcgttgtggct
gatgtgatcgagctgcctgaagctgcttctggtgcttcgcctgccgctgatgccaacttt
gtacagggattcatctcgaagatcattggagacattgatggtgcaatcacacctctggca
cggacaacttcttcagcagctgcaggcgcaggtggagcagcggctcatgatggtgcattt
gagacaagagcagcagaggaaggggcacatccagcagatttgcttgattcaacagacaag
gacatgctagacgccaagtactgggagatcaacatgtacaaatctgctcttgagggtcgt
aaggatgagattggtgtggagggggcagtggtgggcgctttggatgatgatgctgatgtg
aggattgggaataaactgcgaagagacgctttcttggttttccgggcattgtgcaagctc
tccatgaagacaccacccaaggatgctccagctgatcccattgtgatgcgtgggaagatc
cttgctcttgaacttctcaagatattgcttgaaaatgctggggctgttttccggaccagc
gagagatttctaggggctatcaagcagtatctatgcctctcgcttttgaagaactgtgcc
tcggcacatatgatagtctttcagctatcttgttcaatttttattagcttggtttcaaga
ttcagaccaggattgaaggcagaaattggagtattctttcccatgattattctgagagtt
ttggaaaatattgctcaaccaaattatcaagcaaagttgattgttcttcgtttcctggaa
aaactctgtgctgattctcaaatcttggtagacatttttctcaattatgattgtgatgta
cactcatcaaacatatttgagaggatggttaatggtctactaaaaacagcacaagggcct
ccagcaggcgtgtctaccacattggttccgcctcaggacaccacaatgaaaagtgaagcc
atgaaatgcttggttgctattctgagatccatgggagattggatgaataagcagctacgc
attccagatcctgactctcctaaagtagagtcggagcaaaatgataatgatggaggacac
gagatttcccacacagaggataatggagacgaatgtagtgaagcatctgattctcattca
gaaatgtcaaatggggtttcagaggctgcatctttggagcagcgccgagcttacaagatg
gaacttcaggagggtatctctctatttaatcgaaagcccaggaagggaattgagttccta
ataaatgccaacaaggtgggggaatcacctgaggaaattgctgctttcttaaaaagttct
tctggtttgaacaagactatgattggagattatttaggggagagggaagatttatccctc
aaagtcatgcattcatatgtggattcatttgattttcaaggcatggagtttgatgaagcc
attagagcctttcttcaaggtttcagattgcctggagaagctcaaaagattgatcggatt
atggaaaaatttgctgagcgttactgcaaatgcaacccaaaggccttttccagtgcagat
acagcttatgtccttgcttattcagtcataatgctcaacaccgatgcacataatccaatg
gtaaaaaataagatgtcaccagaagatttcattagaaacaatcgaggtattgacgatggg
aaagacctgcctgaagaatttatgaggtccttatatgaaaggatttggaaaaaagagatt
aagatgaaagaagaagaatttgttccccagcagcaaaaatcaacaagctcgaacaaaatt
cttggattggataacattcttaatattgtcgtacgcaaacgagattcacgtatggaaaca
agcgatgatctcattaagcatatgcaggagcaattcaaagaaaaggctcgtatgtccgag
tcagtattctatccagcaacagatgtagtagttttgaaattcatggtcgaggtttgctgg
gctcctatgcttgctgccttcagtgttccacttgaccagagtgatgatgagattgtcata
tcccagtgccttgaaggatttcgcagtgcaatccatgttactgcagctatgtcgatgaag
actcaaagggatgcatttgtcacttcacttgctaagtttacatcacttcactcggctgcg
gatattaagcagaaaaatattgaagccattaaggcaattctattaattgcagatgaagat
ggaaattacttgcaagaagcatgggagcatatattgacctgtgtttctcgttttgaaaat
ctacatctcgtaggagaaggtgctcctccagatgctactttctttgcactgcaacagccg
gacctcgataaatcaaaacaggctaagtcatccattcttcctgttttgaaaaagaagtct
ccaaatactgttccagcttctaaacgaggttcctatgatagtgctggtgtgggtggcaaa
gcttctggggttgatcaaatgaacaatgtggtgacaagcctcttagaacaagttgacatg
gctgaaatgaatcgtgtatttgtaagaagtcaaaaactcaacagtgagggcataattgat
tttgtaaaggctctctgtaaagtttccatggaggaattgcgatctgcttctgatccacgg
gtttttagtctgacaaagattgttgagattgcgcactacaatatgaatcgcatcaggctt
gtctggtcaagcatatggcatgtcttgtctgatttttttgttacaattggctgctcagag
aatctctcaattgcaatatttgctatggattcattgaggcagctggcaatgaagttcctg
gaacgagaagagctggctaactacaatttccagaatgaatttatgaagccttttgttgtt
gtaatgaggaagagccgagctgttgagataagagaactaatcatcagatgtgtctctcaa
atggtcttggcacgtgttagtcatgtgaaatcagggtggaagagtatgtttatggtcttt
gcaacagcttcatatgatgaccataaaaatattgtactcctggcgtttgaaattatcgag
aagattttgcgggagtactttccctacattactgagaccgagtcgacaactttcactgat
tgtgtgaactgtcttattgcatttactaacagtaggtttaacaaggatataagcctcaat
gcaattggttttcttcgattctgtgcggcaaagctagcggaaggtgacattggatcctct
tcaaggttgaaggagaatcctccttctcctcgcttgaccaaggatggaaagcaggaaagt
gcagttcttgttgataaggatgatactatacacttttggtttcctttattagcaggatta
tctgaacttaccttcgacctacgacctgaaatcaggaaaagtgccttgcaggtgttattt
gacacattaagaaaccatggtcatctcttctccttgcctttgtgggagaaggtgtttgat
tcagtgcttttcccaatatttgattacgtacggcatgccattgatccatcaagtggttct
ccacaaggacagaatgtggaaagtgatccttcagaacttgatcaagatgcatggatgtac
gagacatgcactttggccctgcagctagttgtggacctctttgttaagttctatgacaca
gtaaaccctcttcttagaaaaattctgttgctcttgacaagtttcataaagcgtccccac
cagagccttgccggtataggtattgccgcatttgttcgtttgatgagcagtgccggatct
gtcttcgttgatgaaaaatggttagaggtggttttatcgttgaaagaagctgccactgag
acccttcctgatttttcttatattgcatccggagcttaccttgagaatgtaccaatagaa
aatgggggctcttcagaaaagacagaagacgagtctcgaccattggaggatggcactgga
gaagcttctagatcaaggaacttgtattttgcaattggtgatgccaagtgccgggctgct
gtccaactcctattgattcaggctgtgatggagatatataacatgtacagagctcggtta
tcatcacagaacactgtgatcctctttgaggcattgcacactgttgctactcatgctcat
aaaataaacagtgataatgacctgcgatccaagttgcaggagttgggctcgatgacccaa
atgcaggacccacctttgttacgcctggagaacgagtcgtatcagttgtgcttgactatc
ctgcagaacatttgcttggacagatctcccaatgagaggagtgtagaggtggaaagccac
cttgttggcttatgtaaggaggtccttgaggtgtacctgagcactgcaaacccatctcag
ctttctggtgctccgcagccacttggtcattggcttattccggtcggttcttcaaagcgg
agagagcttgcagcccgggcacctcttgttgtctcaaccttgcaagctatcagtggcctt
ggtgactcatctttcgagaagaaccttggccagttcttcccccttcttgctggtctgata
agttgcgaacatggttcaagcgaagtgcaggtggcattgagtgatatgtttagcacttgg
gttggcccggttgttcttcaaacctgctga
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integrated database retrieval system
