Oryza sativa japonica (Japanese rice) (RAPDB): Os03g0284800
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Entry
Os03g0284800 CDS
T02163
Name
(GenBank) Spo11/DNA topoisomerase VI, subunit A family protein
KO
K10878
meiotic recombination protein SPO11
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dosa03036
]
Os03g0284800
Chromosome and associated proteins [BR:
dosa03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
Os03g0284800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
Topo_VI_alpha
fvmX7
Motif
Other DBs
NCBI-ProteinID:
BAF11679
RAP-DB:
Os03g0284800
UniProt:
Q0DSV9
LinkDB
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Position
3
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AA seq
442 aa
AA seq
DB search
MSEKKRRGGAGAGAASGSASKKPRVSTAASYAESLRSKLRPDASILATLRSLASACSKSK
PAGSSSSSSSASKALAAEDDPAASYIVVADQDSASVTSRINRLVLAAARSILSGRGFSFA
VPSRAASNQVYLPDLDRIVLVRRESARPFANVATARKATITARVLSLVHAVLRRGIHVTK
RDLFYTDVKLFGDQAQSDAVLDDVSCMLGCTRSSLHVVASEKGVVVGRLTFADDGDRIDC
TRMGVGGKAIPPNIDRVSGIESDALFILLVEKDAAFMRLAEDRFYNRFPCIILTAKGQPD
VATRLFLRRLKVELKLPVLALVDSDPYGLKILSVYMCGSKNMSYDSANLTTPDIKWLGVR
PSDLDKYRVPEQCRLPMTDHDIKVGKELLEEDFVKQNEGWVKELETMLRTRQKAEIQALS
SFGFQYLTEVYLPLKLQQQDWI
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagaagaagcgccgcggcggggcaggcgcgggggccgcgtcgggctccgcctcc
aagaagccgcgggtctccacggcggcgtcgtacgccgagtcgctccgctcgaagctccgc
cccgacgcctccatcctcgccaccctccgctccctggcctccgcctgctccaaatccaag
cccgcggggtcgtcgtcgtcgtcgtcgtccgcctcgaaggcgctcgcagccgaggacgac
ccggccgccagctacatcgtggtggccgaccaggactccgcctccgtcacctcccgcatc
aaccgcctcgtgctcgccgcggcgcgcagcatcctgtccggccggggcttctccttcgcg
gtgccctcccgcgccgcctccaaccaggtctacctcccggacctcgaccgcatcgtgctc
gtccgccgcgagtccgccaggcccttcgccaacgtcgccaccgcgcggaaggccaccatc
accgcgcgcgtcctctccttggtccacgccgtcctccgcagggggatccacgtcaccaag
cgtgacctcttctacaccgacgtcaagctcttcggcgaccaggcgcagtccgacgccgtc
ctcgacgacgtctcctgtatgctcggctgcacccgctcctccctccacgtcgtcgcgtcc
gagaagggcgtcgtcgtcgggcgcctcaccttcgccgacgacggcgaccggatcgactgc
acgcgcatgggcgtcggcgggaaggccatcccgcccaacatcgacagggtctcaggcatc
gagagcgacgctctcttcatcttgctggtggagaaggacgccgcgttcatgcgtctcgcc
gaggaccggttctacaaccgcttcccgtgcatcatcttgacggcgaaggggcagccggat
gtcgccacacggctgttcttgcggcggcttaaggtggagctgaagctgccggtgctggca
ttggtggactccgacccatatgggctgaagatcttgtcagtgtacatgtgtggttccaag
aacatgtcatatgacagtgccaacctgacaacaccggatatcaagtggctcggagtgcgg
ccaagcgatctggacaagtatcgggtgccggagcagtgccggcttccgatgactgatcac
gatatcaaggtggggaaggagctgcttgaggaggactttgtgaagcagaatgaaggatgg
gtgaaggagctggagacgatgttgcggacgaggcagaaggctgagatacaggctctcagt
tcatttggtttccagtatctcactgaggtctatctacctctcaagctgcagcaacaggac
tggatttga
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