Oryza sativa japonica (Japanese rice) (RAPDB): Os03g0300200
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Entry
Os03g0300200 CDS
T02163
Name
(GenBank) Similar to Ubiquitin-specific protease 16
KO
K14801
pre-rRNA-processing protein TSR4
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dosa03009
]
Os03g0300200
Ribosome biogenesis [BR:
dosa03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
Os03g0300200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDCD2_C
zf-MYND
Motif
Other DBs
NCBI-ProteinID:
BAF11769
RAP-DB:
Os03g0300200
UniProt:
A0A8J8YRG0
LinkDB
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Position
3
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AA seq
419 aa
AA seq
DB search
MESNAEKLRGLTITSLDEEDDEPELPHRSPPASGGGGGGGAGYEDDDEEEEEEAEVTLGF
LEKPKHPGLLLRHLFPSKAGGIPAWLDPVNLPSGNSRCCGFCGEPLQFVLQIYAPIEDNA
ASFHRTLFMFMCPSMACLLRDQHDQWKHRQGNPCRSVKVFRCQLPRSNAFYSSEPPKHND
SDKPLCPGAPVCHWCGTWKGDKLCSSCKKARYCSEKHQTLHWRSGHKSDCLQLISSSEAS
SSIFPAVGKVPASKSWPEYEIAIDYEGAFNSDSCDESNSKSLVMQRPGKPDDMMQSWMDQ
FEADADNKCWASFQERVSRAPKQVLRYCREENAKPLWALSAGCPSNADIPSCSYCRGPLC
YEFQIMPQLLYYFGVKNEPDSLDWATIVVYTCKGSCDQNVSYKEEFAWVQLYPTTTTRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggagtccaacgccgagaagcttcgtggtctcaccatcacctcgctggatgaggaagac
gacgagcccgaactgccccaccgatccccacccgccagcggcggcggcggaggcggcggc
gcgggctacgaggacgacgatgaggaggaggaggaagaggcggaggtgacgcttggtttt
ctggagaagccgaagcacccgggcctcctcctccgccacctgttccctagcaaggccgga
ggcatcccggcgtggttggatcctgtgaacttgccatcggggaactcgcgttgctgcggc
ttctgcggcgagcccctgcagttcgtcctccagatatatgcaccgattgaggacaatgcg
gcatcatttcaccgcactttgttcatgttcatgtgcccgtcaatggcatgcttactccga
gaccagcacgaccagtggaaacatagacaaggcaatccgtgtagaagcgtgaaggttttc
cggtgccagcttccccgtagtaatgccttctactcaagtgaaccaccaaagcacaatgat
tctgacaagccactatgtccaggagctcctgtctgccattggtgcggtacatggaaaggt
gataaactctgtagtagctgcaagaaagcacgctactgctctgagaagcatcagacactg
cactggcgctctggccataagagtgattgcctacagttaatcagttcttctgaagcttca
agctctatttttcctgctgtaggaaaagttcctgctagcaaatcttggccagaatatgag
attgcaatcgactatgagggtgctttcaattctgacagttgtgatgagagtaactcaaag
tccttggtgatgcaaagacctggtaaaccagatgatatgatgcagtcatggatggatcaa
tttgaggctgatgctgacaacaaatgctgggcgtcttttcaagagcgggtctcaagagca
ccaaagcaagtattgagatactgtcgagaagagaatgccaaacctctatgggcgttatcg
gctggttgtccatcaaatgccgatatcccatcatgtagctactgtagaggtccactatgc
tatgaatttcagataatgccacagctgctttattactttggtgtgaaaaatgagccagac
tctcttgattgggcaacaattgttgtgtacacatgtaaaggatcatgcgatcaaaatgtc
agctacaaggaggaatttgcatgggttcagttataccctacaacaaccacaaggtcatga
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