Oryza sativa japonica (Japanese rice) (RAPDB): Os03g0341200
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Entry
Os03g0341200 CDS
T02163
Name
(GenBank) Conserved hypothetical protein
KO
K10895
fanconi anemia group I protein
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
Os03g0341200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dosa03400
]
Os03g0341200
DNA repair and recombination proteins [BR:
dosa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
Os03g0341200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCI_S4
FANCI_S2
FANCI_HD2
FANCI_HD1
FANCI_S1
Motif
Other DBs
NCBI-ProteinID:
BAF11984
RAP-DB:
Os03g0341200
UniProt:
Q0DS04
LinkDB
All DBs
Position
3
Genome browser
AA seq
1284 aa
AA seq
DB search
MGGAGRDASKGDSPPATTATPAMSASAAAAAAAYGTPPSQQPPPPTAESVLRVASRDPSA
AAPLLQALPPDGLDDVLSSLSPASPPNHLALLPAVLALSPSPTAAAAALSALLSAPSWPS
PTLLAVASLLRDLPAAYRHRVPAFVAKVLSLLPAADAQDLPALAYQLLLLASKPLHPRAV
LSGLLRFFGGHRGARLRAPPSIARQVEGTVLMHVAFAVKQDPALAREVVAAVKADAAGTL
SGFAVAVLLSVARVRRFNDAAVGVLRDAVITSRRDYRISRRCKWLPECLKGECARAANCV
EKALLKAVGESIGGREHVVPSIVQVGFLLLEASDSDRKEEVGFNEGVMSTEEVGVNMLKS
LFDIHGMARTEIIEQCKFRILSVKPSQSLPVIRLLGGLVRTHPFQMLEYISHLKELLDYF
AFLNDKISIGLINCILPLTKFSRDLKDYIILVIRKAMFKREDAVRIAATNAIVELIIAEN
KHKRTEANPFQDSSSQPSSSQQPETHLEIGGGLFQELSGLLRRCFMQQARVKEVLYNGLI
QIVTSDPSIAENVLDFLWPHFLNYYTEVGRLSSSDLFVKALSNTQKYLRKCLAEDQRGQT
QETCSLSSHLDTAHCHNFAMIGIIEVFIGFTASKLEKVADEQKEMLEKEILDLIDAHSSF
ERKKSKNKEKVAQRAGNSSDSTAKQMNGPKEYYSATLQKLNERRETFMDSSLYELVRVCV
KQCDADNLEKCSQRPTQSKLNQCHSLLSFVLKACYRMFKSLAAKGSGATTGNVRAVLYED
VKKLVGPMMQLIWWIMLDSKQENGGTKRNLTQGKKHMDSKKDQLYLALTCLTEMSKLSVP
EDHPGDIIDVLVSSAPPNIEDMVHCSQLLGRNDTDPNTGSVHVFLNILKMLYVRVLSQSL
PRESEAVTELILGISRKLHHEQSHLVGHWAASLCQKTILQNPSIAQEMVKLAIHLMIAPD
DLVLVHEMTAELKLITTGEEDSRDSSETFPVINCKTKNSLAAVFLQMVESSLTELDWVIG
KLKVMLALAYDSANIDEDDQPADERTQRLYLEEALYSRSTSVVHVLSSFAHTSLKDSQAE
QFLKLTAKLYKLLARMAKSQIAPKGYKQVMPGLKFQKLAEVTCRMLTAPLYVFVALVQEN
QQASKRGILARIKRESKCIPDLIFQIEDYEKYLIQLSKLTKVNLLRHAKRSVARDFKIQS
KDELERNSTAARAASSENMPEEDAEGPDAPLETNGDEDPQASARSDNTVEDSESDEEGER
VLARRKRAKTNSIVQDSDEEAEDE
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcgccggcagggacgcgtcgaagggcgattccccgccggccaccaccgcaact
ccggcgatgtcggcgtccgccgccgccgccgccgccgcctacggcacgcccccgtcgcag
caaccccctccccccaccgcggaatccgtcctccgcgtcgcctcccgcgacccctccgcg
gcggcgcccctcctccaggcgctcccgcccgacggcctcgacgacgtcctctcctcgctc
tcccccgcctcgccgccgaaccacctcgccctcctccccgcggtgctcgccctctccccc
tcccccaccgcggcggccgccgcgctctccgcgctcctctccgcgcccagctggccatcc
ccgaccctgctcgccgtcgcctccctcctccgcgacctccccgcggcctaccgccaccgc
gtcccggctttcgtcgcgaaggtcctctccctcctccccgccgctgacgcccaggacctc
cccgcgctcgcctaccagctcctcctcctcgcctccaagccgctccacccgcgagccgtc
ctctcgggcctcctccgcttcttcggcggccacaggggcgcccgcctgcgcgcgccgccg
tccatcgcgcggcaggtggaggggaccgtgctgatgcacgtcgccttcgcggtcaagcag
gaccccgcgctggcgagggaggtcgtggccgccgtcaaggccgacgcggcggggacgctc
agcgggttcgccgtggcggtgctgctgtccgtggcccgcgtgcggaggttcaacgacgcc
gcggtgggcgtgctccgggacgccgtcatcacgtctcgccgggattatcggatatcgagg
cgctgcaaatggttgccggaatgcctgaaaggggagtgcgcccgggctgctaactgcgtg
gagaaggcattactgaaagctgttggcgagagcattggtggaagggagcatgttgtgcca
agcattgttcaagtgggttttctcctgttggaggcctcagatagtgacagaaaggaggaa
gttggcttcaatgaaggggttatgagcactgaagaagtaggtgttaatatgctcaagtca
ttgtttgatatccatggaatggcacgaactgagataatcgagcagtgcaagttccggatt
ctctccgtgaagccttctcaaagtttaccagtcattagactgcttggaggtttagttcgt
actcatccatttcaaatgcttgaatacatttcgcaccttaaagaattgctggactatttt
gcattcttgaatgacaagatatcaattggtctgatcaactgtatcctgccactcacgaag
tttagccgtgatctaaaggattacataatattggttataaggaaggccatgttcaagcgg
gaggatgctgtgcggattgctgccacaaatgctattgttgaactgattattgcagagaac
aagcataagagaaccgaagcaaatccttttcaagactcatctagtcaaccaagctctagc
cagcaacctgaaacacatttagagattggtgggggtctctttcaagaactgagtggatta
cttcgcagatgtttcatgcagcaggctagagtcaaagaggtcttgtacaatggactcata
caaattgttacctcagatccgtctattgctgagaatgtccttgatttcctttggccgcac
ttcctaaactattacacagaggttggaagattatcatcaagtgacttattcgtgaaagct
ttatcaaacacccagaagtacttgaggaaatgtcttgcagaagatcaacgagggcagacc
caagaaacctgttctctttcttcacatttggacacggctcattgccataattttgctatg
attggaatcattgaggtttttatcggttttactgcttcaaaactagagaaagtagctgat
gagcaaaaggaaatgttagaaaaagaaatactggaccttattgatgcacatagtagcttt
gagagaaaaaaaagcaagaataaggagaaggttgcgcaaagagcagggaattcaagtgat
tctactgcaaagcagatgaatggacccaaggagtattacagtgcaacactgcagaaatta
aatgaaaggagggagacctttatggattccagtttatatgaacttgtaagggtgtgtgtc
aagcagtgtgatgctgataaccttgaaaaatgcagtcagcgtcctacccaatctaaattg
aaccaatgccacagtctattatcttttgttctgaaagcctgttatagaatgttcaaatca
cttgcagccaagggaagtggagcgactactggaaatgtaagagctgtgctgtatgaagat
gtaaaaaagttagtggggccaatgatgcagcttatatggtggataatgctagattcaaag
caagaaaatggtggaaccaagaggaacttgacccaagggaagaaacacatggatagcaaa
aaggaccaactgtatctagcattgacatgcctaacagaaatgtctaagctaagtgttcca
gaagatcatcctggtgatattattgatgtcctggtatcatcagctccgccaaatatagaa
gatatggtgcattgcagccagcttcttggcaggaatgacactgatccaaatacaggaagt
gtccatgtttttctgaatatattaaagatgttatatgttcgagttctttcccagtcacta
ccacgtgaatctgaggctgtaactgaactgattctcggcatatcaagaaagctacatcat
gaacaaagtcaccttgttggacattgggctgcaagtttgtgtcaaaaaactattctccag
aatccaagcattgcacaggagatggtaaaacttgctatccatcttatgatagctccagat
gatctggttctcgtgcatgaaatgactgcagagttgaagttgataaccactggagaagag
gactcgagagattcgtcagagacatttcctgttataaattgtaaaacaaagaattcactt
gctgctgtgtttcttcaaatggttgaatcatctcttactgagctggattgggtaattggt
aagcttaaggtaatgcttgcattagcatatgattctgctaatattgatgaggatgatcaa
cctgctgatgaaaggacgcaaaggctatatttagaggaagcactgtactcaagatcaaca
tccgtagttcatgtcctttcgtcttttgcacatacaagccttaaggattctcaggcagaa
cagtttctgaaactgactgccaagttgtacaagctattggctcgcatggccaagtctcag
attgcacctaagggatacaaacaagtcatgccaggtctcaagtttcagaaattggcagaa
gtaacttgcaggatgctgactgctccactttacgtcttcgtcgctttagttcaagagaat
cagcaagcgtcaaaaagaggaatcctggctaggatcaaaagagagagcaaatgcatccca
gatcttattttccagatcgaagattacgagaagtatttaatccagctgagcaagcttaca
aaggtgaacctcttgaggcatgccaagcgcagcgtggcaagagactttaagattcaatcg
aaggacgaactggaaaggaactctactgcagccagagctgcgtcatctgaaaatatgcct
gaggaggacgcggaaggtccagatgctcctcttgaaacaaatggtgatgaagatccacag
gccagtgcacgcagtgataacacagttgaagattctgaatctgatgaagagggggaaaga
gtcttagcgagacggaaaagagctaagacgaacagcattgtccaggattctgatgaggaa
gcagaagacgaatag
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