Oryza sativa japonica (Japanese rice) (RAPDB): Os03g0397500
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Entry
Os03g0397500 CDS
T02163
Name
(GenBank) Pyruvate kinase family protein
KO
K12816
pre-mRNA-processing factor 17
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Os03g0397500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dosa03041
]
Os03g0397500
Spliceosome [BR:
dosa03041
]
Complex C
Other components
Step II factors
Os03g0397500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
eIF2A
Beta-prop_Vps41
Beta-prop_NWD2_C
Beta-prop_SCAP
Motif
Other DBs
NCBI-ProteinID:
BAF12216
RAP-DB:
Os03g0397500
UniProt:
Q0DRC2
LinkDB
All DBs
Position
3
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AA seq
573 aa
AA seq
DB search
MDLLQSSYTPDDEDDDEQQPLSSPDASPLRLPAKSAAPAVDDTALALSAAAASTSRPLDP
SLHLVPFNPTADQLWAPVLGPQHPHAPISSASGNRNHKLGHVEDAAVLPFLFDEQYNTFH
RFGYAADPSGLHIVGDAQPSAEPDTVYNLAPSEHKRRRLQSKDEEGANQEPLPPEAKNPA
SDEWILRNKQSPWAGKKEAPPAELTEEQRQYAEAHAAKKAEKEARGEGKGEKSDMVAKST
FHGKEERDYQGRSWITPPKDAKASNERCYIPKRCVHEWVGHTKGVSAIRFFPKYGHLLLS
ASMDCKIKIWDVLESRTCMRTYMGHSKAVRDISFSNDGTKFLSAGYDRNIQYWDTETGQV
ISTFSTGKVPYVVKLNPDEDKQHVLLAGMSDKKIVQWDMKSGQITQEYDQHLGAVNTITF
VDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNSNWLAAQSLDNQIL
IYSTKERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGSCWFWDWKSCRRFKTL
KCHNGVCIGCEWHPLETSKVATCGWDGVIKYWD
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggatctcctccagtcgtcctacacgccggacgacgaggacgacgacgagcagcagccc
ctctcctcgccggacgcctcgccgctccgcctccccgccaagtcggccgcccccgccgtc
gacgacacggcgctcgcgctctccgccgccgccgcgtccacctcccgcccgctcgacccc
tccctccacctcgtcccctttaaccccaccgccgaccagctctgggcgcccgtcctcggg
ccccagcacccccacgcccccatctcctccgcctccggcaaccgcaaccacaagctcggc
cacgtcgaggacgccgccgtcctccccttcctcttcgacgagcagtacaacaccttccac
cgcttcggctacgccgccgacccctccggcctccacatcgtcggcgacgcccagccctcg
gccgagcccgacaccgtctacaacctcgccccctccgagcacaagcgccgccgcctgcag
tccaaggacgaggagggcgccaaccaggagcccctaccgccggaggccaagaacccggcg
tccgacgagtggatcctccgcaacaagcagagcccctgggccggcaagaaggaggcacca
cccgcggagctcactgaagagcagcgtcagtatgcggaggcgcacgctgccaagaaggcc
gagaaggaggcgcgcggcgaagggaagggcgagaagtctgatatggttgccaagagtact
ttccatgggaaggaggagagggattaccaaggacggtcatggatcacaccgcccaaggat
gccaaggcgagcaacgagcgctgctatattcccaagaggtgtgtgcacgagtgggttggg
cacaccaagggggtctcggcgattaggtttttccccaagtatggacaccttttgctgtct
gcgagtatggattgtaagattaagatctgggatgtgctcgagtcgaggacatgtatgcgg
acgtacatggggcactctaaggcggtcagagatatatcgttttctaatgatgggactaag
ttcttgagtgctgggtatgacaggaatatacagtattgggatactgagaccgggcaggtg
atctcgaccttctctactggcaaggtcccttatgtagtgaagctcaacccggatgaggat
aagcagcatgttctcctcgctgggatgagtgacaagaagattgtgcagtgggatatgaag
tcagggcagataacccaagagtacgaccagcacttgggagcagtcaataccatcactttt
gtagataataataggaggtttgtgacatcaagcgatgacaagtcgcttcgtgtgtgggag
ttcggcatcccagtggtgattaagtatatcagtgaaccacacatgcattcaatgccatca
atatcactgcacccgaattccaactggctggcagcacagagcttggacaatcagatattg
atatacagtaccaaggagaggtttcaacttaacaagaagaagcggtttgcgggtcacatt
gtggcaggttacgcttgtcaagtgaacttctcaccagatgggaggttcgtgatgtcagga
gatggtgaaggtagttgctggttctgggactggaaaagctgcaggagatttaagacgttg
aagtgccacaatggagtttgcattggatgtgagtggcatcccttggagactagcaaggtt
gcaacatgtggatgggatggcgtaattaagtactgggattga
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