Oryza sativa japonica (Japanese rice) (RAPDB): Os03g0583900
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Entry
Os03g0583900 CDS
T02163
Name
(GenBank) DEAD/DEAH box helicase, N-terminal domain containing protein
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dosa03036
]
Os03g0583900
Chromosome and associated proteins [BR:
dosa03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
Os03g0583900
microRNA pathway
RISC loading complex
Os03g0583900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Helicase_C
DEAD
Dicer_dimer
PAZ
ResIII
dsrm
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BAF12478
RAP-DB:
Os03g0583900
UniProt:
Q10HL3
LinkDB
All DBs
Position
3
Genome browser
AA seq
1410 aa
AA seq
DB search
MGGPLTAAGGRGDGGAKAVEPLRPPPPPDPKTMARWYQLEALERAVRGNTLAFLETGSGK
TLIAVMLLRAYAHRVRRPDSRRFAVFLVPTVVLVGQQARVVEQHTDLVVKQFCGEMGVDF
WDAATWRSQLEDGEVLVMTPQILLDNLRHSFFRLQDIALLIFDECHHARGNTPYACIFKE
FYHPQLNSSASDPLPRIFGMSASLIYSKDLNPHNYSKQISEIENLMNSKVYTVDSESALS
EYIPFASTKIVDFDDSNISSELHANILSCLNRLNKKHIEALDRKLHGSSLENAKQRISKL
HHTFVYCLYNLGVWLAAKAAEVQSYEENSLSFWGETLDKNVEGFIRNYSEEVHRELSCFL
KNGHIGEKFPADSQDGILTPKVHCLIRTLLQYRHMQDLRCIVFVERVITSIVLEHLLSSI
HQMSGWNVKHMAGSRPGLLSQSRKNHTEIVESFRKGKVHIIIATQILEEGLDVPSCNLVI
RFDPSATVCSFIQSRGRARMENSDYLLLVGRGDVEAQTNAEKFLASGQIMREESLRLGSI
SCQPLENTLCEDTYYRVESTRAIVTLNSSVPLIHFFCSKLPSDEYFNPLPRFDIDKASGT
CTLHLPKSSPVQTVNVEGEGSILKETVCLKACQELHAIGALTDSLLPELDVPCDEEPDIV
VENKIEQPSYFPEEFVDNWRSFSRLGIYYCYKISLEGCPKTASPTDILLALKCDLGSDFT
SSSFKLPGGQDNASVTMKYVGIIHLNQEQVIIARRFQTTILSFLIGDDHLEVSNGIKYFH
EMQVPIGVVYLLLPLVSGRIDWCSMKFSSSPIYEANNKHMTHCHSCKDIDLLQTKDGPFC
RCILKNSIVCTPHNNIFYVISGFLDLDANSCLPQHDGTVVTYKDYFKTRHGLTLTFENQP
LLAGSKHVKVRNFLHNCYSKKEKEPGDRYSVELPPELCRIIMSPVSANNLHIFSYVPSIM
FRIQCMLLSVKLKVQLGPTVQQFDVPVLKILEALTTKKCQEEFSQESLETLGDSFLKYVT
TRHLFSEYRLQHEGILTKMKKNLISNAALCQLACSSNLVGYIHAEEFNPRDWIIPCLDYD
ERDNKKISFLAPNGMYSQRKMSIKSKRIADSVEALIGAYLSTAGEKAAFLLMKSLGMNIE
FHTEIPVERKISMKAEEFINVRSLEGMLGYKFNDSLLLLEALTHGSYQTSGPTSCYQRLE
FLGDAILDHLFTEYYYSKYPDCTPELLTDLRSASVNNNCYAHAAVKSGLNKHILHSSSEL
HRKMSYYLEEFGQSFTGPSYGWEAGIGLPKVLGDVIESIAGAIYLDSKCDKEVVWRSMKR
LLEPLATPETIEPDPVKGLQEFCDRRSFKITYEKNHVDGVSSVIARVKAGETTYSATKSG
PCKLVAKKLASKAVLKDLIAGHKDTEAAAV
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgggtggccccctcaccgccgccggaggtcgaggagatgggggcgccaaggcggtggaa
ccgctccggcctccgccgccgcccgacccgaagacaatggccagatggtaccagctggag
gcgctggagcgggcggtgcgggggaacaccctggcgttcctggagaccgggagcgggaag
acgctcatcgcggtgatgctgctccgggcgtacgcgcaccgcgtgcggaggccggactcg
cgccgcttcgccgtcttcctcgtccccaccgtcgtcctcgtgggccagcaggcgcgcgtc
gtcgagcagcacaccgacctcgtcgtcaagcagttctgcggcgagatgggggtcgacttc
tgggacgccgccacctggcgatcccaactggaggacggcgaggtgctcgtcatgacgccg
cagatcctgctcgacaacctccgccacagcttcttccgcctccaggacatcgcgctgctc
atcttcgacgagtgtcaccacgccaggggcaatacgccgtacgcctgcattttcaaggaa
ttttatcacccccagttgaattctagtgcgtcagaccctctgccaaggatatttgggatg
tctgcttcgctcatttattcaaaagatttgaatccgcacaattattcaaagcaaatttct
gagattgagaatctcatgaattccaaggtgtacactgttgatagtgaatcagctttgtcg
gagtacataccatttgcttctacaaaaatagtggactttgacgattccaacatttcatct
gagctgcatgccaatattctcagttgtttgaatagattgaataaaaagcatatagaagct
ctggacagaaaactacatggttcatctctggaaaacgctaagcaaaggatatcaaaattg
catcatacatttgtatattgtttatataatctaggagtatggctggcagcaaaggctgct
gaggtacaatcatacgaggaaaacagcctatccttctggggtgaaacattggataaaaat
gttgagggcttcattagaaactacagcgaagaagtacatagagaactttcatgtttcttg
aagaatggtcatattggtgaaaaatttccagctgattctcaagatgggatattgacaccc
aaagttcattgccttattcgaactcttctgcagtacaggcatatgcaagacttaagatgc
attgtgtttgttgagagagttatcacaagcatagtattagagcacctactttcatctatt
catcaaatgtctgggtggaatgttaagcacatggcaggaagccgtcctggtttgctatct
cagagcaggaaaaatcatacagaaattgttgaatcttttcgaaaaggaaaggtacatata
attattgccacacaaattttggaggagggtttagatgtgccaagttgtaacttggtaatt
cgctttgatccatcagcaacagtatgcagctttatacagtcccgtggtcgagctaggatg
gaaaactctgactatcttttacttgtcggaaggggggatgtggaagctcaaactaatgca
gagaagtttctcgcaagtgggcaaataatgcgggaggaatctctgagattgggatcaatt
tcttgtcaaccacttgagaacaccttgtgcgaggatacctattaccgtgtcgagtcaact
agagcaattgtgacactaaactccagcgttccattaattcattttttctgctcaaagctt
ccatcggatgaatattttaatcctctaccaagattcgatatagacaaggcatctggcaca
tgcactctgcatcttcctaagagcagtcctgtgcagacagttaatgtagaaggagaaggt
tctattctcaaggagacagtttgtcttaaggcctgccaagaactacatgccattggtgca
ctcacagattctcttttaccagaattagatgttccatgtgatgaagaacctgacatcgtt
gttgagaacaaaattgagcagccttcttactttccagaagaatttgtggataattggcgc
tccttttctcgtcttggcatatattattgctataagatctcattggaaggatgtcccaaa
acagcttctccaactgacatactgttagctttgaagtgtgatttgggatctgactttact
tctagctcatttaaattgccaggtgggcaagacaatgctagtgttaccatgaaatatgtt
ggcatcatccatctcaatcaagaacaggtaattattgctagaagatttcagacaactatt
ctttcgtttcttattggtgatgaccatttggaggttagcaatggtattaaatacttccat
gagatgcaagtgcctattggagtagtctatctacttctgcctttagtttctggcagaatt
gattggtgcagtatgaagttctcatcctcaccaatatatgaagctaacaacaaacatatg
acacattgccattcttgtaaagatattgatttactgcagacaaaagatggtcctttctgc
aggtgcatccttaaaaattccattgtgtgtacccctcataataacatcttttatgttatt
agtgggtttcttgacttagatgcaaattcctgtttgcctcaacatgatgggactgttgtt
acctacaaagattattttaagactaggcatggtcttactttgacttttgaaaatcagccg
ctcttggctggcagtaaacatgtgaaagtgcggaacttcctccacaactgctactctaaa
aaagaaaaagaacctggtgatagatatagtgttgagttgccacctgaactctgcagaatt
atcatgtcaccagtgtccgccaataatttgcacatcttctcatatgttccttccataatg
ttccgcatccagtgcatgcttctttctgtgaaattaaaggtccaattaggcccaacagtg
cagcagtttgacgtaccggttttgaagatcctggaagcattaacaacaaagaaatgccaa
gaagaattttcacaggaatcattagaaacacttggggattctttcctcaaatatgttaca
actcggcacctttttagtgaatacaggcttcaacatgaaggcatattaacaaaaatgaag
aaaaacttgatctccaatgcagctctgtgccagctggcctgcagcagtaatcttgtgggt
tacattcatgctgaggagtttaatccaagagattggatcatcccttgcttggactatgat
gagcgtgataacaaaaaaatttcctttctggcacccaatggtatgtacagccaaaggaaa
atgtctattaaaagtaagaggattgcggattcagttgaggccttaattggggcttacctc
agtactgctggggaaaaggcagcatttcttttgatgaaatcattagggatgaatatagaa
tttcacactgaaattccagttgaaaggaaaatttcaatgaaagctgaagagttcattaat
gtgaggagcttagagggaatgcttggttacaagttcaatgattctttattattgctcgaa
gcattgacacatggctcatatcagacttctggccctacttcatgctatcagaggctcgag
tttcttggagatgctattttggatcatcttttcactgaatattactacagcaaataccct
gactgtactccagaattgttgacagatcttagatctgcctctgtgaacaacaattgttac
gcgcatgcagctgttaaatcaggattaaacaagcatatccttcactcatcatcagaactg
cataggaagatgagctactaccttgaggaatttgggcagtcatttacaggtccatcttat
ggctgggaagcgggcattggtctaccaaaggttctcggggatgtgattgaatcaatagct
ggtgccatttatctcgacagcaagtgtgacaaggaggttgtttggagaagcatgaagcgg
ctattggaacctcttgccacccccgaaaccatcgagcctgacccggtgaaagggctgcaa
gaattttgtgatcgtagatcattcaaaataacctacgaaaaaaaccatgttgatggagtc
tcatcggtcattgctcgggtgaaggctggagagactacatactccgcaacaaaatcaggt
ccctgcaagttggtggcgaaaaagttggcatcaaaggctgtgcttaaagatctgattgct
ggtcacaaagatacagaggctgctgcagtatag
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