Oryza sativa japonica (Japanese rice) (RAPDB): Os03g0625900
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Entry
Os03g0625900 CDS
T02163
Name
(GenBank) WD40-like domain containing protein
KO
K14793
ribosomal RNA-processing protein 9
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dosa03009
]
Os03g0625900
Ribosome biogenesis [BR:
dosa03009
]
Eukaryotic type
90S particles
Other 90S particles
Os03g0625900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_SPT8
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_WDR19_1st
WD_LRWD1
WD40_RFWD3
Beta-prop_WDR75_2nd
Beta-prop_DCAF4
Beta-prop_BBS7
Motif
Other DBs
NCBI-ProteinID:
BAF12612
RAP-DB:
Os03g0625900
UniProt:
Q75LV5
LinkDB
All DBs
Position
3
Genome browser
AA seq
511 aa
AA seq
DB search
MAPRPRKRVSRPKPRATSRGRGGGDEDPFFESEPKRRRGGGRDEDIESEDSDLEGVAAAA
AGGVGDDGEEEEEEEEEQETAGEKKMRIAKELLKKVTDAARRRREDDEDEDEGEEAGRRR
VADILLKRQFEESGRKRMELADRILQPDPEDGFKMLVKHRQPVTAVVLSKDSDKGFSASK
DGVIVHWDVETGKSEKYLWPSENVLVSHHAKPPLSAKRSKQVLALAVSADGRYLASGGLD
RHIHLWDVRSREHIQAFSGHRGAISCLSFGPDSSELFSGSFDRKIMQWNAEDRTYMNCLF
GHQNEVLTMDALSKDRLLTVARDRTMHLWKIPEESQLLFRAPATASLECCCFIDDKEFLT
GSDDGSVELWSIMRKKPTHIIRNAHPVFRNNLNSLENNVEENGIHKPESVSSAQSWVSAI
AARRGSDLAASGAANGSVRLWAIEPDSKGIRPLFSLRLDGFVNSLAIPKSGRFIVAGVGQ
EPRLGRWGRVRSAQNGVVIHPIRLKEESEDL
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcgtccgcggaagcgggtctcgcggcccaagccacgcgccacctcccgcggc
cgcggcggcggggatgaggaccccttcttcgagtccgagcccaagcggcgccgcgggggc
ggccgcgacgaggacatcgagagcgaggacagcgacctggagggcgtggcagcggctgct
gctggtggcgtcggcgacgatggggaggaggaggaggaggaggaggaggagcaggagacg
gcgggggagaagaagatgcggatcgcgaaggagcttctcaagaaggtgacggacgcggcg
aggaggaggagggaggatgacgaggacgaggacgagggcgaggaagccggccggaggcgg
gtcgccgatatcctcctcaagaggcaattcgaggagagtggcaggaagcggatggagctc
gccgacaggatattacaaccagatcctgaggatggctttaagatgctcgtgaagcaccga
caaccagttactgctgttgttttatccaaggacagtgataagggattttcagcatcaaag
gatggagtcattgtgcattgggatgttgaaactggaaaaagtgagaagtatttatggcca
agtgaaaatgtcttggtttctcatcatgctaagccacctctatcagctaaaagaagtaag
caagtattagctctagctgttagtgcagatggtcgttacttggcaagcggaggtttggat
cgtcacatccatttatgggatgttcggtcacgggagcacatacaggcatttagtggtcat
cgaggagcaatatcttgtctttcctttggaccagactcatcggagctattctctggttct
tttgaccgtaaaataatgcagtggaatgcagaagacagaacgtacatgaactgcctattt
ggccatcagaacgaagtcttgacaatggatgcacttagtaaagataggcttttgactgta
gcacgggaccgaacaatgcatctttggaagataccagaagaatcacaactactgttccgt
gctcctgctactgcatcattggagtgttgctgctttattgatgacaaggaatttttaact
ggatctgatgatggaagtgttgagctttggagcattatgagaaagaagcctactcacata
ataagaaatgctcatccagtattccgtaacaaccttaattcgcttgaaaataatgttgag
gaaaatggcatacataaacctgaaagtgtctcatcagcccaatcatgggttagtgctatt
gctgcaagaagaggttctgatcttgctgcatcaggagcagcaaatggttcagttcgtctt
tgggctattgaacctgattctaagggcattcggccattatttagtttgagactggatgga
tttgttaattctctcgccatcccgaaatctggacgctttattgttgctggtgtgggccag
gagcctcgtcttggaagatggggccgtgtccgatcagctcaaaatggagttgtaatccat
ccaatccgactaaaagaagagagcgaggacttgtag
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integrated database retrieval system
