Oryza sativa japonica (Japanese rice) (RAPDB): Os03g0657000
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Entry
Os03g0657000 CDS
T02163
Name
(GenBank) TATA-binding protein TBP2
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Os03g0657000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dosa03000
]
Os03g0657000
03021 Transcription machinery [BR:
dosa03021
]
Os03g0657000
Transcription factors [BR:
dosa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
Os03g0657000
Transcription machinery [BR:
dosa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
Os03g0657000
RNA polymerase III system
TFIIIB
Os03g0657000
RNA polymerase I system
SL1/TIF-1B
Os03g0657000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-ProteinID:
BAF12726
RAP-DB:
Os03g0657000
UniProt:
Q8W0W4
LinkDB
All DBs
Position
3
Genome browser
AA seq
203 aa
AA seq
DB search
MAAEAAAALEGSEPVDLAKHPSGIIPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRF
AAVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQN
IVGSCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKV
RDETYTAFENIYPVLTEFRKVQQ
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaggcggcagcggcgctggaggggagcgagcccgtggacctggccaagcac
ccctccggcatcatccccacgctccaaaacatcgtatcgacggtcaatttggattgcaaa
ttagacctcaaagctatagctttgcaagctcgcaatgcagaatataatccaaagcgtttt
gctgcggttatcatgagaataagagaaccaaaaactacagctctgatatttgcatcgggt
aaaatggtctgtactggggcaaagagtgaacaacaatccaagcttgcagcaagaaagtac
gctcgtattatccagaagcttggctttcctgctaaattcaaggatttcaagattcagaac
attgttggctcttgtgatgttaaatttccaatcaggctggagggacttgcatattctcat
ggtgctttctcaagttatgagccagaactctttcctggtctgatatatcggatgaagcaa
ccaaagattgttcttctgatttttgtttcaggcaagattgttttgaccggagcaaaggtg
agggatgagacgtataccgcctttgagaacatataccctgtgctaacggagttcagaaaa
gtccagcagtga
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