Oryza sativa japonica (Japanese rice) (RAPDB): Os03g0715500
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Entry
Os03g0715500 CDS
T02163
Name
(GenBank) WD40-like domain containing protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
Os03g0715500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dosa04131
]
Os03g0715500
Membrane trafficking [BR:
dosa04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
Os03g0715500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
AlaDh_PNT_N
Motif
Other DBs
NCBI-ProteinID:
BAF12991
RAP-DB:
Os03g0715500
UniProt:
Q10DX1
Q0DP47
LinkDB
All DBs
Position
3
Genome browser
AA seq
984 aa
AA seq
DB search
MVHSAYDAVELVSGVPGDIVAVAAYAGRLLVAGKDGSLRIYASPGHAGGGIPRDGPYALE
RQQPSLWRRGTPLAMEVSAGRELLLSLAECVNLHRLPGLETVAVIGKTKGANLFAWDDRR
GLLAVGRWKRLTIFRLDSGREFVEVKEFGVPDTVKSMAWCGDNICLGIRKEYMIINSMTG
ALTEVFSSGRNAPPLVVALPTGELLLGKDNIGVFVDQNGKLIQDGRIIWSDTPASVAIHR
PYAVARLPRHVEIRSLRAPNALVQTVVLRDVQKLVETENCILAVLARSVYGLLPVPIGAQ
IVQLTASGEFEEALALCKLLPPEDSNLRAAKESSIHIRYGHFLFDNGSYEEAMEQFSDSH
VDITYVLSLYPSLVLPQTHIIGEHDRLQDLPELARESSDVTDDMEPYSLQLHESDDKSPL
EIKKMSHNALIALVKYLHKKRNGIIERATAEVTEEVVSGAVHHSSILSESYRSKKPNKKR
AQTHTSSIAREMATVLDTSLLQALILTGQSSGAIELLKGLNYCDLKICKEFLEERSDYMV
LLELYKSNEMHREALQLLNQLVEESKAEMGKNDFNKKFNPQMIIEYLRPLCRSDPMLVLE
SSLYVLERNPSDTIELFLSENVPADLVNSYLKQHAPNLQSTYLELMLSMSVSGINPNLQN
ELVQLYLSEVLDWHKILKEEGNWTEKTYSPTRKKLITTLENNSGYNTDILLKRLPQDALF
EERAILYGKINQHLRALSLYVHKLQMPERAVAYCDRVYEEGAQQPSKSNIYFNLLQIYLN
PRKAEKEFEQKIVPVASQYPGIQKVTKVRGARMGKKVVEIEGADDVRFSPSGTDSGRSDG
DGDGDDVSDGGPIMLNEALELLSQRWDRINGAQALRLLPRDTKLQDLVLFLEPLLRNSSE
HRRNYMVIKNLIFRANLQVKEDLYKRRQAVLKIDGDSMCSLCHKRIANSAFAIYPNGQTL
VHFVCFRESQQIKAVRGVNSVKRR
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacagcgcgtacgacgccgtcgagctggtctccggcgtgccgggcgacatcgtg
gccgtggccgcctacgccgggaggctcctcgtcgcggggaaggacggctccctccgcatc
tacgcctccccgggccacgccggcggcgggatcccgcgggacgggccgtacgcgctggag
cggcagcagccctcgctgtggcgccgcgggacgcccctggcgatggaggtcagcgccggc
cgcgagctcctgctctcgctcgccgagtgcgtcaacctccaccgcctccccgggctcgag
accgtcgccgtcatcgggaagaccaagggcgccaacctcttcgcctgggacgaccgccgg
ggcctcctcgcggtcggccgctggaagcgcctgaccatcttccgccttgacagtgggagg
gagtttgttgaggtgaaggaatttggagttccggataccgtgaaatcaatggcctggtgt
ggcgacaacatttgtcttgggattagaaaggagtatatgatcataaatagtatgactggt
gcattaactgaagtgttttcttctggaaggaatgctccacctttagttgtggctcttcct
actggggagctcctcctgggaaaggataatattggagtatttgttgaccaaaatgggaaa
cttattcaagatggcaggataatttggtcagacacgcctgcctctgttgctatacatagg
ccatatgcggtggcacgcctgccacggcatgttgagatacggtcccttagagcccccaat
gcattggttcagacggttgtacttcgtgatgttcaaaagcttgttgaaactgagaactgt
atacttgctgtgctagcccgctctgtttatggcttgttgcctgttcctattggtgcccag
atagtgcagttgactgcatctggtgaatttgaggaggctctggcgttgtgtaagctactt
cctccagaggattcaaacctacgagctgcaaaggaaagctcaatacacataagatatgga
cactttttatttgataatgggagctatgaggaggcaatggagcagttctctgattcacat
gtggatattacttatgtcctatctctatatccatctcttgttctgcctcaaacgcacatc
ataggtgaacatgaccggctgcaagatctgccagaattagcaagagaatcatctgatgtg
acagatgatatggaaccatactctctacaacttcatgaatctgatgataaatctccattg
gagataaagaaaatgagccacaatgctctaattgcccttgtgaagtatttgcacaagaaa
agaaatggaataattgagagagcaacagctgaagtcaccgaggaggtggtctctggagct
gtgcaccacagctcaatcttatctgagtcatatcgatcaaagaagccaaataagaagcga
gctcagacgcatacaagctctattgctagagaaatggctactgtactggacacatctctt
cttcaagctcttattcttactggacagtcttcaggggcaatagaattgttgaagggactt
aactattgtgatctgaagatatgcaaagaatttttagaggaaaggagcgattatatggtg
ttacttgagctctacaaaagcaatgagatgcaccgtgaagctctccaactgcttaatcaa
ttagttgaagaatcaaaggctgagatgggaaaaaatgattttaacaaaaagttcaatcca
caaatgatcattgaatatctaaggcccctctgtcggtctgacccaatgctggttttggaa
tcatctttatatgtccttgaacgcaacccttcagacactattgagctctttttatcagaa
aatgttccagcagatttagtaaattcatatctaaaacagcatgctccaaatttgcagtca
acttacttggaactaatgctttcaatgagtgtatctgggatcaaccctaatctgcaaaat
gagctggtacaactatacctttctgaggttcttgactggcacaagattctgaaggaagag
ggaaactggactgagaaaacatattccccaacacggaagaagctgataactacattagag
aacaattcaggttacaacacagatatacttcttaagcgtcttccgcaagatgctcttttt
gaagagcgcgctatattgtatgggaaaataaatcaacatctccgtgcactctctctttat
gtgcataagctccagatgccagagcgagcagttgcatattgtgaccgtgtttacgaggaa
ggagcacaacaaccttccaaatcaaatatctatttcaatctcctacaaatctatctgaac
ccaagaaaagctgaaaaggaatttgagcagaaaattgttccagtggcatcacagtaccct
ggaattcagaaggttactaaggttagaggggcgcgtatgggtaaaaaggttgttgagatt
gaaggggctgatgatgtgcgctttagccccagtggaactgatagtggtcgaagtgatggt
gatggtgatggtgatgatgttagtgatggaggcccaataatgttgaatgaagcacttgaa
ttgttaagccaacggtgggatagaataaatggtgcccaagctcttcgtttgttacctaga
gacacgaaactccaggatctggtgttatttcttgaaccacttctgcggaactctagtgaa
catcgacgcaattatatggttatcaagaacttgatttttcgggcaaatttgcaggtaaag
gaggatctgtataaacggcgtcaagctgttctgaagattgatggagatagcatgtgttct
ctttgtcataagcggattgcaaatagtgcttttgctatttatccaaatgggcagacgttg
gtgcattttgtctgctttagagaatcacagcagattaaagctgttagaggagtaaactct
gtgaaacgtagatag
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