Oryza sativa japonica (Japanese rice) (RAPDB): Os03g0746600
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Entry
Os03g0746600 CDS
T02163
Name
(GenBank) WD40-like domain containing protein
KO
K17890
autophagy-related protein 16-1
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04136
Autophagy - other
dosa04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
Os03g0746600
04136 Autophagy - other
Os03g0746600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dosa04131
]
Os03g0746600
03029 Mitochondrial biogenesis [BR:
dosa03029
]
Os03g0746600
Membrane trafficking [BR:
dosa04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
Os03g0746600
Others
Specific organelles associated proteins
Auto phagosome
Os03g0746600
Mitochondrial biogenesis [BR:
dosa03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
Os03g0746600
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
WDR55
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
DSE1_N
Beta-prop_TEP1_2nd
ATG16
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR41
Beta-prop_WDR90_POC16_2nd
Beta-prop_NOL10_N
NBCH_WD40
Beta-prop_EIPR1
WDR90_beta-prop_4th
ASA1
Beta-prop_VPS8
CFAP251_N
Beta-prop_DCAF4
Beta-prop_Aladin
Beta-prop_NWD2_C
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
ODF2_N
SIKE
Beta-prop_DCAF12
DUF2120
CHASE2
CEP135_N
Beta-prop_SPT8
Beta-prop_NUP159_NUP214
V_ATPase_I
Motif
Other DBs
NCBI-ProteinID:
BAF13165
RAP-DB:
Os03g0746600
UniProt:
Q10CZ9
LinkDB
All DBs
Position
3
Genome browser
AA seq
511 aa
AA seq
DB search
MTMVEAEAGKEAIRRALRSLRRRHLVEEGAHRPAIEALARPFAAQAVEWKEKAEKHELEL
QQCYKAQSRLSEQLVTEIEEGKASKALLKEKETLITTMQTELEQTREENTQLKQSLEEKT
SALDLIIQEHQAVKAELEQALTKQKVAEDENRNLIDRWMLEKMKDAERLNEANAMYEEMV
LKLKSAGVGGIQHNALQEADGIIRRSEAGYMDIMETPIPSTCRITIRAHDGGCGSIIFQH
NTDKLISGGQDQTVKIWSAHTGALTSTLQGCLGSVNDLAVTNDNKFVIAACSSNKLFVWE
VNGGRPRHTLTGHTKNVSSVDASWVKSCVLASSSNDHTIKIWDLQSGFCKSTIMSGSNAN
SLAFIDGVTLCSGHRDGHLRLWDIRSAKCTSQTFAHLDVSSVSVSRNRNFILTSGKDNVH
NLFDPRTMEVCGKFKAMGNRVVSSWGRPCISPDENSIAAGANDGSVYIWSRLKKDGVPTI
LQGHSSSVVSSSWCGLGPLATADKHHIYIWT
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgacgatggtggaggccgaggccggcaaggaggcgatccggcgagccctgcggtctctg
cggcggaggcatctcgtcgaggagggcgcccaccgcccggccatcgaggcgctcgcccgg
cccttcgccgcccaagcggtggagtggaaagagaaggctgagaagcatgaattggagctg
cagcaatgctacaaggctcagtcacgtttgtccgagcagctcgttaccgagatagaagag
gggaaagcatcaaaagcgctgcttaaagagaaagaaacactgattactaccatgcagact
gaactcgagcaaaccagggaagaaaatacgcagctcaagcagtcgcttgaagaaaaaaca
agcgctttagatcttataattcaggagcaccaggcagttaaagctgaacttgaacaggca
ttaacaaaacagaaagtggcagaagatgaaaacaggaatctgattgatcgatggatgctt
gagaagatgaaggatgcagagaggcttaatgaggcaaatgcaatgtatgaggagatggtt
ctaaagctgaagtcagctggtgttggtggtatacaacacaatgcactacaagaagctgat
ggcatcattcgtcgttctgaagctgggtacatggacatcatggaaacaccaatcccatct
acatgcagaatcactatccgtgctcatgatggtggctgtggatctataattttccagcat
aacacagacaagctaatcagtggtggccaggatcaaactgtcaagatttggtctgcacat
accggtgctttaacctccactctacaaggctgtttggggtctgtcaatgatcttgctgtg
actaatgacaacaagtttgtgattgctgcctgtagctctaacaaattgtttgtatgggaa
gttaatggggggcgcccacgtcacactctgactggtcacacaaaaaatgtttcatccgtt
gatgcaagctgggtgaagagctgtgttcttgctagttcatccaatgatcataccatcaag
atttgggatcttcagtcaggcttctgcaaaagcaccataatgtcagggagcaacgccaac
tcactagctttcattgatggtgtcaccctttgctcgggtcatagggatggacaccttcgg
ttatgggacatccgaagtgcaaaatgcactagtcagacattcgctcatcttgacgtaagc
tctgtcagtgtgtcacggaatagaaatttcattcttacaagtggaaaggataacgtgcac
aacctttttgatcctagaacaatggaagtttgtggaaaattcaaggccatgggtaacaga
gtggttagcagctggggcaggccttgcataagccctgatgaaaactccatagctgctggt
gctaatgatgggtctgtttacatatggtcaagattgaaaaaggatggggtaccgacgatc
ctacagggccattcttcgtcggtagtttcaagttcatggtgtgggttaggacctcttgct
accgctgacaagcatcatatctatatctggacttga
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integrated database retrieval system
