Oryza sativa japonica (Japanese rice) (RAPDB): Os03g0805100
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Entry
Os03g0805100 CDS
T02163
Name
(GenBank) Similar to Squalene synthase (EC 2.5.1.21)
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00100
Steroid biosynthesis
dosa00909
Sesquiterpenoid and triterpenoid biosynthesis
dosa01100
Metabolic pathways
dosa01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
Os03g0805100
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
Os03g0805100
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
dosa01006
]
Os03g0805100
Enzymes [BR:
dosa01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
Os03g0805100
Prenyltransferases [BR:
dosa01006
]
Terpene biosynthesis
Squalene/phytoene synthase
Os03g0805100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
PhoU_div
Motif
Other DBs
NCBI-ProteinID:
BAF13539
RAP-DB:
Os03g0805100
UniProt:
Q0DMJ9
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All DBs
Position
3
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AA seq
403 aa
AA seq
DB search
MGVLSRPEEVLPLVKLRVAAGRIKRQIPPEEHWAFAYTMLQRVSRSFALVIQQLGPDLRN
AVCIFYLVLRALDTVEDDTSIPAAVKVPILKEFHRHIYNRDWHYSCGTKDYKLLMDKFRL
VSTAFLELGQGYQEAIEEITRLMGAGMAKFICKEVETVDDYNEYCHYVAGLVGYGLSRLF
HAGGTEDLASDSLSNSMGLFLQKINIIRDYLEDINEIPKSRMFWPREIWSKYVNKLEDLK
YEENSEKAVQCLNDMVTNALSHAEDCLQYMSALKDHAIFRFCAIPQIMAIGTCAICYNNV
NVFRGVVKMRRGLTARVIDETNTMSDVYTAFYEFSSLIESKIDNNDPNASLTRKRVDAIK
RTCKSSCSLKRRGYDLEKSKYNSMLIMVVLLLVAIVLGMIYAK
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgctgtcgaggccggaggaggtgttgccgctggtgaagctgcgggtggcggcg
gggcggatcaagcggcagatcccgccggaggagcactgggccttcgcctacaccatgctg
cagagggtctcccggagcttcgcgctcgtcatccagcagctcggccccgacctccgcaat
gccgtgtgcatcttctatctcgtgctccgagccctcgacactgttgaggacgacactagc
attcctgccgcggtgaaggtgccgatccttaaggaattccatcggcatatctacaaccgc
gactggcattattcatgtggaacaaaagactacaaattactgatggataagtttcgcctt
gtctccacggctttcttggagcttggtcaaggttatcaagaggcaattgaagaaatcact
aggctaatgggagcaggaatggcaaaatttatctgcaaggaggttgaaactgttgatgac
tacaatgagtactgtcactatgtagcagggctagtggggtatgggctttccaggctcttt
catgctggtgggacggaagatctggcttcagattcactttcaaattcaatgggcttgttt
ctgcagaaaatcaatataattagggattatttggaggacataaacgagataccaaagtca
cgtatgttctggcctcgagaaatatggagtaaatatgtcaataaactcgaggatttgaaa
tacgaggaaaattcagaaaaggcagttcagtgtttgaatgatatggtgactaacgctctg
tctcatgctgaagactgcctccaatacatgtcagcattgaaggatcatgccattttccgt
ttttgtgcaatacctcagataatggcaattgggacatgtgctatttgctacaataatgtg
aatgtctttagaggagttgttaagatgaggcgtgggctcactgcacgagtaattgatgag
acaaacacaatgtcagatgtctatactgctttctatgagttctcttcgctgatagaatcg
aagattgataataatgatccaaatgcttccctaacgcggaaacgtgttgatgcgataaag
agaacctgcaagtcatcttgctcactaaagagaaggggatacgatttggagaagtcaaag
tacaactccatgctgataatggttgtacttctgttggtggctattgttttgggcatgata
tatgccaagtga
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