Oryza sativa japonica (Japanese rice) (RAPDB): Os03g0805200
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Entry
Os03g0805200 CDS
T02163
Name
(GenBank) Similar to RNA helicase (Fragment)
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dosa03019
]
Os03g0805200
03041 Spliceosome [BR:
dosa03041
]
Os03g0805200
03036 Chromosome and associated proteins [BR:
dosa03036
]
Os03g0805200
Enzymes [BR:
dosa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Os03g0805200
Messenger RNA biogenesis [BR:
dosa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
Os03g0805200
mRNA cycle factors
Common to processing body (P body) and stress granule
Os03g0805200
Spliceosome [BR:
dosa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
Os03g0805200
Chromosome and associated proteins [BR:
dosa03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
Os03g0805200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BAF13540
RAP-DB:
Os03g0805200
UniProt:
Q75HJ0
LinkDB
All DBs
Position
3
Genome browser
AA seq
637 aa
AA seq
DB search
MRSSWADSVANAEESAPATGAAPTPVANHQNSRPTRSAYVPPHLRGQAPTTTAAPAPAPG
PAAVQPSASVQPSGYAAIVGGSRWAGPASGDGTGAVGGPRQSVGGRGGGGGGGGGWNSRP
GWDRRDREPNPFANSEAEEATEVDFDTANTGINFDAYEDIPVETSGHDVPPPVNTFAEID
LGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTGSGKTAAFCFPIISGIMSSR
PPQRPRGSRTAYPLALILSPTRELSVQIHEEARKFAYQTGVRVVVAYGGAPIHQQLRELE
RGVEILVATPGRLMDLLERARVSLQMVKYLALDEADRMLDMGFEPQIRKIVEQMDMPPRG
VRQTMLFSATFPKEIQRMASDFLADYIFLAVGRVGSSTDLIAQRVEFVLEADKRSYLMDL
LHAQKANGTHGKQALTLVFVETKRGADALENWLYTNGFPATSIHGDRTQQEREYALRSFK
SGATPILVATDVAARGLDIPHVAHVINFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNEG
NLSLARPLCELMQEANQEVPQWLERYSARSSFGGGGGRNRRSGGARFGGRDFRRDNRGGG
GGGYGGGGGGYGGGGYGGGGGYGGGYGGGQGSTSSWD
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgcgatcttcatgggctgattcagttgcgaacgccgaggaatcggcgcccgcgactggt
gctgctcccacccctgttgctaatcaccagaactcacgccccactcgcagcgcatacgtg
cctcctcacctccgtggccaggcaccaaccacaactgcagctccagctccagctccagga
ccagctgctgtccagccctcagcttctgtacagccttctggttacgcagctattgttggt
ggctctcgctgggctggccctgccagtggtgatggtactggcgctgtaggtggcccacgc
cagagcgttggtggtcgtggtgggggtgggggtgggggtgggggttggaactcccgccct
gggtgggaccggagagaccgtgaacctaacccttttgccaatagcgaggcagaggaagcc
acagaggttgattttgatacggcaaacactggcatcaactttgatgcctatgaggacatt
cctgtggaaacaagtggccatgatgtgccaccgccagtcaatactttcgcagagattgat
ttgggtgatgcgctgaatgagaacatacggaggtgcaaatatgtgaaacctacgccagtg
cagcggtatgccattccaatctccattgcagggcgggatctcatggcttgtgctcagaca
gggtctggaaagacagccgccttttgtttccctatcattagtgggattatgagctctagg
ccaccacagaggccaaggggatcgaggactgcataccctcttgcattgattttatccccc
actcgcgaattatcagtccaaattcatgaagaagcaaggaaattcgcataccagactggt
gttagggtggttgttgcgtatggtggagcaccaatacatcaacagttgagggaattggaa
aggggcgttgaaatccttgtggcaactcctggtcggttgatggatctgctggagagggct
agagtatcactgcaaatggtgaagtacttagctcttgatgaagctgatcgaatgcttgac
atggggttcgagccgcaaattcgtaaaattgttgagcagatggacatgccccctcgcggt
gtgaggcagacaatgttgtttagtgctacttttccaaaagaaatacagcgcatggcttca
gatttccttgcggactacatcttccttgctgtaggaagagttggttcaagtactgacttg
attgctcaaagggtagagtttgtccttgaagcggataaaagaagttacctcatggatctc
ctccatgcccaaaaagcgaatggtactcatgggaagcaagcgcttactctggtctttgtg
gagacaaagaggggagctgatgctttggagaactggctttacacaaacgggttccctgca
acaagtattcatggcgaccgaacacaacaggaaagagagtacgcgcttagatcattcaag
agtggagcaacacccatccttgttgcgactgatgtagctgcccgtggacttgacatacct
catgttgcccatgtcatcaattttgacctcccaaatgacatagatgactatgttcatcgt
atcggacgaacaggacgagcagggaagtctggcttggcaactgcatttttcaacgagggc
aatctatccctggcgaggccgttatgtgagctaatgcaggaagcaaaccaggaggttcct
caatggcttgaacgatactcggcccgttcttcgttcggaggtggtggtggcagaaaccgc
cgatcaggcggtgcccgttttggtggccgtgacttccgccgcgacaataggggtggaggc
ggcggcggttatggtggtggcggtggtggctatggaggcggcggttatggagggggcggt
ggatatggcggtggctatggtggtggtcaaggctcaactagttcgtgggactga
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