KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os03g0831800
Entry
Os03g0831800      CDS       T02163                                 
Name
(GenBank) Similar to Sec13p
  KO
K14004  protein transport protein SEC13
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03013  Nucleocytoplasmic transport
dosa04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    Os03g0831800
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    Os03g0831800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dosa03019]
    Os03g0831800
   04131 Membrane trafficking [BR:dosa04131]
    Os03g0831800
Messenger RNA biogenesis [BR:dosa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     Os03g0831800
Membrane trafficking [BR:dosa04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    Os03g0831800
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    Os03g0831800
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    Os03g0831800
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_WDR35_TULP_N Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_IFT140_1st EIF3I Beta-prop_WDR3_2nd WD40_Gbeta WD40_MABP1-WDR62_2nd
Other DBs
NCBI-ProteinID: BAF13711
RAP-DB: Os03g0831800
UniProt: Q851A2 B7EUU9
LinkDB
Position
3:35790047..35792098
AA seq 301 aa
MSSNKIELDHKDMVHDSAIDYYGKSLATASSDSTVQISSIGGASAPSQLLATLSGHYGPV
WRVAWAHPKFGSILASCGYDGRVVVWKEGAAGQWSQAHVFDNHKSSLNSIAWAPYELGLC
LACGSSDGSISVMTMRPDGGWDSTTIEQAHPVGVMAVSWAPATALGSIVGSGELVQKLVS
GGFDCVVKVWAFVNGSWKLDSVLPSDMHTDCVRDVSWAPVLGLAKFTIASASEDGKVVIW
TKGKEGDKWEGKVMHDFEAPAWRVSWSLTGNILSVAAGSGDITLWKEASDGQWEKVTKVE
P
NT seq 906 nt   +upstreamnt  +downstreamnt
atgtcgtcaaacaagatagagcttgaccacaaggacatggtccatgattctgccatcgac
tactacgggaagagccttgccacagcctcctcagactccaccgtgcagatcagcagcatt
ggaggtgcatccgcgccatcccagctgcttgcaaccctcagcggacactatggacctgtg
tggcgtgttgcatgggcccatcccaagtttggttcgattcttgcatcctgcggctacgat
ggccgtgtcgtagtttggaaggagggtgcagctgggcaatggtctcaggctcacgtattc
gacaaccacaagtcttcactcaactccattgcttgggctccgtatgagcttggcctttgc
cttgcctgtggctcttccgacgggagcatctctgtcatgaccatgcgcccggatggagga
tgggactccacaacaattgagcaagcacaccctgttggggtgatggcagtctcatgggct
ccagcaaccgcactcggttccattgttggctcaggggaacttgtccagaagctcgtctct
ggtggcttcgactgtgttgtcaaggtgtgggcttttgtcaatggcagctggaagctggat
agcgttctgccctccgacatgcacacggactgcgttagagatgtatcctgggcacctgtt
ttgggcctcgcaaagtttacaatcgccagtgcctctgaagacggtaaggttgtcatctgg
accaaggggaaagagggcgacaaatgggaagggaaggtgatgcatgacttcgaggctccg
gcatggagggtgtcctggtcactgaccggaaacatactgtccgtggcggccggctccggc
gatatcacactgtggaaggaggcatcagatggtcagtgggagaaggtgaccaaggtggag
ccatag

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