Oryza sativa japonica (Japanese rice) (RAPDB): Os03g0840400
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Entry
Os03g0840400 CDS
T02163
Name
(GenBank) Homeodomain-like containing protein
KO
K15198
transcription factor TFIIIB component B''
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dosa03021
]
Os03g0840400
Transcription machinery [BR:
dosa03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
Os03g0840400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPR_2
PPR
Myb_DNA-bind_7
PPR_1
PPR_3
PPR_long
Myb_DNA-binding
E_motif
DYW_deaminase
Myb_DNA-bind_6
SANT_DAMP1_like
Motif
Other DBs
NCBI-ProteinID:
BAH92435
RAP-DB:
Os03g0840400
UniProt:
C7J029
LinkDB
All DBs
Position
3
Genome browser
AA seq
1632 aa
AA seq
DB search
MLRAAYRPGLFLRNNLLALYCRCGDMRHARLLFDGMPRRDAVSWNTLIAGYSGLGSCRLA
LDAFRDARASGDGVDRFTFAAALASCARVGDWRDGRVVHGLAVVSGLARTAFLTNSVIDM
YAKCGMIDEVRLLFDRAEERGEASWNLLLSAYVRMGWPEVAVNVLVWMHRSGVKLDSFAL
GGILKACSELGDSEDVRRMLHSCVVKVGLDLDVFVGSAMVDMYAKNGGLEEAIKVFDCIP
NQNVVVYNAMIAGFARLGNDPCPEIRIEAVTLFSNMLKKRIKPSKFTFKSVLEVCNLTNA
VRCGRQIHAHVILSGLQGDEFIASVLINLYSKARCVNDSLRCFDMTVKEDVFIWTSMITA
FVQNEHFEKALYLFRELLYTRKGTDQFTISSVMSACAALSVPTTCKQIHCHAVKTGLDQF
TVSGNSQIAMYRNIGDLKASKQTFEQISCLDTFSWSAMILSYAVHGYESKALELFEKMKN
LGVMMNESASLAALIACSHQGLGDEGLRYYENTIPDDGFSLDVKLKACMVDLLGRVGKIA
DAEDFIMSSGSENDPILWHALLRACRVHGDKERCTKIGEKLMELEPFSASSYVMLYNLYM
DAGKISLAMRTRGLMRERGISNEAGISWTDFGGSIHNFIDGDNSCSHNTIHTTLEELLVR
VKQKTEHGGTNIWELEFQSRKLSESSISRHGELLAVAFGLTTLPSVAPVRVMKNQRISWE
SHETLKLLSEGCSSSVSCHLPLQYNILLGEVASRAGEGRGSCSGHIAMIDDEADFGNITD
ATEGQAAAKFRPKARAKPRKTSLPSRSLAPHPTVESTDENVETLNKDSTSQEQSVDKKAA
SLGCHGSETDGNACASGGILDTPSEDVVTVSLGLVNNPDVALDSSTVFASSAHKVSQNEE
NNDDVSHVATHKENMVVSDTQAPPTCCSARTIDDLADFEGLCDDTHVEEERVAKFQPKFR
VKTSKAASKSQRTNQKAGVSTVDVLSQNKEDGKDQAGCNDKQLHSPTRHQESVQISYSQA
HLGTHNSTIDDVANSDSIMEEPAQEEMAAKFQPRLRPKAGGASPGVAETIDAACVATPEF
GVSSVDVVSQDTEEDSHREGLSDDSCQKYIDEEAITTSGTGPPQDLDDTVDLDSHAEMVN
PHPDGSPLIIEELSAGTTVKFQPYVRRKKGKGKSVSFVPPNVSHAHAPTDTNFETSNSSH
FCKDIATGESLSNLPQQASEKICISGEHHPDDQECNDPENQYHEGEPYDHVIEQEPERDA
RETGTSMKLRNRRKLQKDGIPEHTADDIMDEDFGEPPSDEQDNDSGDEYTARGKQKGRRK
SREKNINKEPSRGTKRTSGDSTIEESQKQKLQKNKSKASSGGQKKTSKDSSVEQPEKKLT
HRIRRKRMEEVKTLLETPDHEIDRMKLSVTHLRLLQEAKERIKASFVVPHLLVLFIEHFC
AVDIQFAFCFYRAKKFHQDHRPLIIGKTTWGLFGSNGNVQGTSQFGDMDDEYNEQDNWDN
DRTENHVVENTTKLNYHSYMNRQTRAKWSKSETDKFYEGLQQFGSDFAMIQHLFPDKSRN
QVRQKFKAEEKKHPMQVHDAIMHRSRDNLYFKEVIKKLNIEDVQPDINNTHEQEGTSNEE
DPGNKVCFETSV
NT seq
4899 nt
NT seq
+upstream
nt +downstream
nt
atgctccgcgccgcctacaggccgggcctcttcctgcgcaacaacctccttgccctctac
tgccgctgcggcgacatgcgccacgcccgcctcctgttcgacggaatgccgcgcagggac
gccgtctcgtggaacacgctcatcgccggctactccggcctgggctcttgccgcctggcc
ctcgacgcgttccgggacgctcgggccagcggggatggtgtggataggttcacgttcgcc
gcggcgcttgcctcgtgcgcccgcgtgggggactggagggacgggcgggtggtgcacggg
ctggccgtggtgagcgggcttgcacggaccgcgttcctgaccaattcggtcattgacatg
tatgccaaatgtgggatgattgatgaggtgaggctgctgttcgatcgagccgaggaacgg
ggcgaggcttcttggaacctgctgttgtcagcgtacgtgaggatggggtggccagaggtg
gcagtgaatgtgcttgtttggatgcaccggtcgggggtgaagctggacagttttgctttg
ggtggcatcctcaaggcttgctctgagctaggtgattcagaggatgttcggaggatgctg
cacagttgtgtggttaaggttggtttggacttggatgtgttcgtcgggagtgcaatggtg
gacatgtacgcgaagaatgggggattggaggaggcgatcaaggtatttgattgcatccct
aatcaaaatgtggtagtttacaatgccatgatagcaggatttgctcggttgggtaatgac
ccgtgccctgagattagaatcgaagcagtcacgcttttttcaaacatgctcaagaagagg
ataaaaccgtcaaagtttacgtttaagagtgtgcttgaagtgtgcaatttgaccaatgca
gtgcgatgtggtaggcagatacatgcccatgtcatactcagtgggcttcaaggtgacgag
tttattgcaagtgtgctgattaacttgtactcaaaagcacggtgtgtaaatgacagtctg
agatgcttcgatatgaccgttaaagaagatgtcttcatatggacatccatgattacagca
tttgtgcagaacgagcactttgagaaggcactatacttgtttagggagcttctctacacc
agaaaagggacagatcaattcaccatatcaagtgtgatgagtgcctgtgctgctctttct
gtaccaacaacctgtaagcagatacactgtcatgcagtcaaaactggtcttgatcaattt
actgtctctggcaattcccagattgctatgtacaggaatataggtgatcttaaggcttca
aaacagacatttgagcagatttcatgtctggacactttctcatggtccgctatgatcctg
agctatgcggttcatggctatgaaagcaaggccctagagctctttgagaaaatgaagaat
cttggtgtcatgatgaatgagagtgcttctcttgctgctcttattgcttgcagccatcag
gggctgggagatgaaggtctcaggtactacgagaacacgataccagatgatggcttttcc
ctggatgtgaaactcaaagcgtgcatggttgacctccttggccgtgttggcaagatagct
gacgctgaagatttcataatgagttctggatcagaaaatgacccgatactttggcatgca
ctattgcgtgcttgcagagtccatggggacaaagaaagatgtacaaaaattggagagaaa
ctgatggaacttgagccgttttctgctagttcatatgtcatgttgtataacttatacatg
gatgctggaaaaatctcattggctatgaggacgagaggcctaatgagagagcgaggcatc
agtaacgaagctggaattagttggaccgactttggaggatccattcataatttcattgat
ggagataactcctgttcacataacacaattcacacaaccttggaggagttgttggtcagg
gtgaaacagaagactgagcatggtggaacaaacatttgggagttagaattccaaagcaga
aagcttagtgagagctcaatcagcagacatggtgaattattggcagtggcttttgggttg
acaactttgccatctgttgctcctgtaagagttatgaagaatcagaggatatcctgggaa
agccacgaaactctgaagttgctatcagaaggttgttcaagttcagtatcatgccatcta
cctctccagtataatatacttcttggggaggtggcgagcagagcaggggaggggagggga
tcctgcagtggtcatatagcaatgattgatgatgaggctgactttggcaacatcactgat
gccacagaagggcaggcagctgcaaagttccgtccgaaggcacgggccaagccccgtaag
acatctttgccatccagatccctggcacctcatcctactgtggaatcaacagatgaaaat
gtggaaacattaaataaagatagcacctcacaagaacagtctgttgataaaaaagcagca
tcattaggatgccatggtagtgagacagatggtaatgcttgtgcttctggcggtatactt
gacacaccttctgaagatgtggtgacagtatccctggggcttgtgaataatcctgatgtg
gcattggattcttcaacagttttcgcttcttctgcacataaagtttcccaaaatgaagag
aataatgatgatgtatctcatgtggctacacacaaagaaaacatggtggtttcagatacc
caagcaccaccgacctgttgcagtgccaggacaattgatgatttggctgactttgaagga
ttgtgtgatgatactcatgttgaggaagaaagagttgcaaaattccagccgaagtttcgg
gtgaaaaccagcaaggccgcatcgaaatctcagaggactaaccaaaaggcaggagtctcc
actgtagatgtgctctcccaaaacaaagaagatggtaaagatcaggcaggatgcaatgac
aagcagctgcactctcctactagacatcaagaaagtgtacagatctcatattctcaagca
cacctgggaactcataacagtacaatcgatgacgttgctaactctgatagtattatggaa
gaaccagctcaagaggaaatggctgcaaaattccaacctagactgcgaccaaaggctggt
ggagcttcacctggggttgctgagactattgatgctgcttgtgtagctactccagagttt
ggggtttcctctgtagatgtggtttcccaagatacggaagaagatagccatagagaaggc
ctcagtgatgattcatgccaaaaatatatagatgaagaggctattacaacttcaggcact
gggccaccacaggatttggatgatactgttgatttagactcgcatgctgaaatggtaaat
ccacatcctgatggtagtccgttgatcattgaagagctctcagcgggaactactgttaaa
tttcaaccttatgttcgaaggaaaaaaggcaaaggaaaatcagtatcttttgttccacca
aatgtttctcatgcgcatgctcctacagacaccaattttgagacaagcaactctagccat
ttctgtaaagatatagcaactggtgaaagtttaagcaacttgccccagcaagcatctgaa
aagatctgtattagtggcgaacatcatccagatgatcaagaatgtaatgacccagagaat
caataccatgagggggagccatatgatcatgttattgaacaagagccagaaagggatgcc
agagaaacaggaacatcaatgaaattacgaaacaggagaaaattacaaaaagatgggata
cctgagcataccgctgatgatatcatggatgaagactttggtgaacctccatctgacgaa
caagataatgatagtggtgatgagtacaccgctagaggcaagcagaagggcaggagaaaa
tcaagggagaaaaatattaacaaagaaccttcgagaggtaccaagcgcacctcgggggat
tccactatagaggaatcacagaagcagaagcttcagaaaaataaaagtaaagcatcttca
gggggtcagaagaaaacatcaaaagattcatcggtggaacaacctgagaagaagcttaca
caccgaattcgtcgaaagagaatggaagaagtcaagactttactagaaacacctgatcac
gagatagatcgcatgaagctaagtgtgacacatcttagactgttacaggaggcgaaagaa
cgtattaaggcgagttttgtcgtgccacatttattagttctgtttattgaacatttttgt
gctgttgatatccaatttgctttttgcttctatagggcaaagaaattccatcaggaccat
cgtcctctaatcataggcaaaaccacttgggggttgtttggatcaaacgggaacgttcag
ggcacctcccaatttggagatatggatgatgagtataacgaacaagacaactgggacaac
gacaggactgagaatcatgtggtcgaaaatacaaccaaacttaattaccattcatacatg
aacagacaaacacgagccaaatggtccaaatctgaaacggacaagttttacgagggtctt
caacaatttggtagcgattttgcaatgatacagcatctcttccctgataagagccgtaat
caggtgcgacaaaaatttaaagctgaggagaaaaaacatccaatgcaagttcatgatgcc
ataatgcatcgctcgagagataatttgtattttaaagaagtaatcaaaaagctcaacatc
gaagatgtccagccagatatcaacaatacacatgaacaggagggtacatcaaatgaagag
gaccctggaaataaggtttgttttgaaactagcgtataa
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