Oryza sativa japonica (Japanese rice) (RAPDB): Os03g0858100
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Entry
Os03g0858100 CDS
T02163
Name
(GenBank) Similar to CRM1 protein (Fragment)
KO
K14290
exportin-1
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03008
Ribosome biogenesis in eukaryotes
dosa03013
Nucleocytoplasmic transport
dosa03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Os03g0858100
03008 Ribosome biogenesis in eukaryotes
Os03g0858100
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
Os03g0858100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dosa03019
]
Os03g0858100
03009 Ribosome biogenesis [BR:
dosa03009
]
Os03g0858100
03016 Transfer RNA biogenesis [BR:
dosa03016
]
Os03g0858100
03036 Chromosome and associated proteins [BR:
dosa03036
]
Os03g0858100
Messenger RNA biogenesis [BR:
dosa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Os03g0858100
Ribosome biogenesis [BR:
dosa03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
Os03g0858100
Pre-60S particles
Os03g0858100
Transfer RNA biogenesis [BR:
dosa03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
Os03g0858100
Chromosome and associated proteins [BR:
dosa03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
Os03g0858100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
IBN_N
CRM1_repeat
mTOR_dom
Motif
Other DBs
NCBI-ProteinID:
BAF13873
RAP-DB:
Os03g0858100
UniProt:
Q0DLL5
LinkDB
All DBs
Position
3
Genome browser
AA seq
1070 aa
AA seq
DB search
MAEKLRDLSQPIDVPLLDATVAAFYGTGSKEERNAADQILRDLQNNPDMWLQVVHILQNS
HNLNTKFFALQVLESVIKYRWNALPTEQRDGIKNYISDVIVQLSSNEASFRQERLYVNKL
NIILVQVLKHEWPARWSSFVPDLVAAAKSSETICENCMAILKLLSEEIFDFSRGEMTQQK
IKELKSSLNSEFRLIHELCLYVLSATQRPELIRATLATLHAFLSWIPVGFIFESPLLETL
LKFFPMAAYRNLTLQCLTEVAALQFGDFYNVQYVKMYTIFMMQLQAILPPGTIPDAYANG
SSEEQAFIQNLALFFTSFFKNHMRILEASPENRAALLLGLEYLIGISYVDDTEVFKVCLD
YWNVFVLELFEAHNQMEPAASVNMMGLQAQMLPGVDGTITAVQQRRQLYSGPLSKLRMLM
ICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTEQQMLKKL
SKQLNGEDWSWNNLNTLCWAIGSISGSMVEEQENRFLVMVIRDLLNLCEITKGKDNKAVI
ASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHEMHPGVQDMACDTFLKIVQKCKRKFV
TQQVGENEPFVSELLSSLATTIGDLEPHQIHTFYESVGHMIQAESDNTKRDEYLKRLMSL
PNQKWAEIIGQASQSIDILKNQDVIRSVLNILQTNTSVASSLGPHFFPQISLIFLDMLTV
YRMYSELVSSTIAEGGPFASRTSFVKLLRSVKRETLKLIETFVDKAEDLPHIGKQFVPPM
MDPILADYARNVPDARESEVLSLFATIINKYKGEMLEDVPRIFEAVFQCTLEMITKNFED
YPEHRLKFFSLLRAIGTHCFQALIQLSSQQLKLVIDSINWAFRHTERNIAETGLSLLLEI
LKNFQASGFQNQFYKTYFLNIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCVVDGLTEPLW
DASSVPYQYTDNAMFVRDYTIKLLGSSFPNMTPTEVTKFVDGLLSSKHDLPSFKNHIRDF
LVQSKEFSAQDNKDLYAEEAAAQRERERQRMLAIPGLIAPSELQDEMVDS
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaagctgagggatctgagccagcccatagacgtcccgctgctggacgccact
gtcgccgccttctacggcaccggatctaaggaagagaggaatgccgctgatcagatacta
cgggatctacagaataatccagatatgtggctgcaggtggtccacattctgcagaattct
cacaacttgaacaccaagttctttgccctccaagtacttgaaagtgttataaagtatagg
tggaatgcattgccaactgaacaacgtgatggcatcaagaattacatatctgatgttatt
gtccagctctccagtaatgaggcttcttttcggcaagagagactttatgttaataaactc
aacattatactggtgcaggttctgaagcatgagtggccagctaggtggtcatctttcgtt
cctgaccttgttgctgctgcaaagagtagtgaaaccatatgcgaaaattgcatggctata
ttgaagcttttaagcgaagaaatttttgatttttcaagaggtgaaatgacacaacagaag
attaaagaactgaagtcatcacttaacagtgaatttcgtcttattcatgagctatgttta
tatgtcctatctgcaacacaaagacctgagctcatccgtgctacactggctacacttcat
gctttcttatcatggataccagtgggcttcatatttgagtcacctttgctggagacatta
ctgaagttctttcctatggctgcttatcggaaccttacactccagtgccttacagaggtc
gctgctcttcagtttggtgatttttataatgtgcagtatgtgaagatgtatacgattttc
atgatgcagttgcaggctattcttcctcctggaacaattcctgatgcttatgctaatggc
tccagtgaagaacaggcattcatacaaaatctagctctttttttcacttctttcttcaag
aatcacatgcgcatattggaggcatctccagaaaatagagctgcattacttctgggcctt
gagtacctcattggaatttcatatgttgatgacacagaggtttttaaggtgtgtttggat
tactggaatgtgtttgttttagagctatttgaagcacacaatcaaatggagcctgcagca
tctgtaaacatgatgggacttcaggctcagatgctccctggagttgatggcaccatcaca
gctgttcagcagaggcgtcagctttactcaggcccactatcaaaattacgaatgttgatg
atttgtcggatggcaaaaccagaggaggtactgattgtggaagatgaaaatgggaatatt
gtacgtgaaacaatgaaagacaacgatgttcttgtccagtataagattatgagggaaaca
ctgatctacttgtctcatcttgatcatgaggatacagagcagcaaatgctgaagaaattg
agtaagcaattaaatggagaagactggagttggaataacctcaatactctctgctgggca
atcggatcaatatctggttctatggtggaggaacaggaaaataggttcttggtaatggtt
attcgcgatttattaaatctctgtgaaatcacaaaggggaaggataataaagctgtgatt
gccagtaacatcatgtatgttgttggtcagtacccaagatttctcagggctcattggaag
ttcttgaaaacggtggttaacaaactatttgagttcatgcatgagatgcatcctggagtt
caggatatggcgtgtgatacttttctgaaaattgttcagaaatgcaagcgcaaatttgtc
acacaacaggtgggcgagaacgaaccatttgtttctgaactgttgtccagccttgccacg
acaattggtgatcttgagccgcaccagattcatacgttttatgaatcggttggccacatg
attcaagctgaatctgataacactaagagagatgaatacctcaaaagactgatgagcctc
cctaatcagaaatgggccgagataattggacaggcaagccaaagcattgatatcctgaag
aaccaggatgttattagatctgttcttaacatcctgcagacaaacacaagtgttgctagc
tcacttggaccacactttttcccgcaaatttccctaatctttcttgacatgttgacagtt
tacagaatgtacagtgagcttgtatcaagcaccattgctgaagggggaccttttgcctca
aggacctcctttgtaaaactccttagatctgtcaagagggaaacattgaaattgattgag
acttttgtggacaaagctgaagatctaccacacattgggaaacagtttgttcctcctatg
atggatcctattcttgctgactatgctagaaatgttcccgatgctagggaatctgaagtt
ctgtccctgtttgcgacgatcataaacaaatacaaaggtgaaatgcttgaagacgtgcct
cgcatatttgaggctgttttccagtgcactcttgagatgatcactaaaaactttgaagat
tacccggagcatcgcctcaaatttttctctttgcttcgtgcgattggcacccattgcttc
caagcattaattcagctttcaagtcagcaattgaaacttgtgattgactctatcaactgg
gcatttagacatacagagagaaacatcgcagagactggtctcagtctattgctggaaatt
ttaaagaactttcaggcctcaggattccaaaatcaattctacaaaacttattttttgaat
attgaacaagagatctttgcagttctgacagacacattccacaagcctggtttcaagctt
catgttttggtgctgcagcacttattttgtgtggttgatggtctgacggagcctctctgg
gatgcatcctcagtaccataccaatatactgacaacgctatgtttgtccgagattacaca
ataaaacttttaggttcatcatttcccaacatgacacctactgaggttacaaaatttgtt
gatgggcttcttagttcaaaacatgaccttccaagcttcaaaaaccatattagggatttc
ctggtgcaatcaaaggagttctcggctcaggataataaggatttgtatgctgaagaggct
gctgcacaaagagagagggagcgtcaacgaatgcttgccattccagggcttattgcccca
agcgaattacaagatgagatggttgattcataa
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