Oryza sativa japonica (Japanese rice) (RAPDB): Os03g0858400
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Entry
Os03g0858400 CDS
T02163
Name
(GenBank) WD40-like domain containing protein
KO
K23325
transducin beta-like protein 2
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
dosa03012
]
Os03g0858400
Translation factors [BR:
dosa03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
Os03g0858400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR75_2nd
Beta-prop_HPS5
NBCH_WD40
Beta-prop_IFT140_1st
Ge1_WD40
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Nucleoporin_N
Beta-prop_DCAF4
DUF6476
Motif
Other DBs
NCBI-ProteinID:
BAF13875
RAP-DB:
Os03g0858400
UniProt:
A3APY2
LinkDB
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Position
3
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AA seq
444 aa
AA seq
DB search
MAAAAASLVSLPLLSAIFGAAIALLFLSGYLRRKRAAIAHLPPSATAAAPDQPKQVRPSN
QNQPKKGHQRSHHAVDKDAAKKHHHLDVNTLRGHTDSVTALHFSDDACNLATVCADGAVR
VFRVDDVSSKSFKILRINLPAGAHPTAIAFSQGASSVVVAAQALLGSSLYMYADVGAPPA
GGNKQQGKLSPPEIKWEHRKIHGKESVLNLAAARATYGTGDGSTILISCSEATDIKIWHG
KSGKELGTVDTNQLKNNMADISPNGRFIAAAAFTADVKVWEIVYSKDSSVKEVNKVMQLK
GHKSAVTCLCFALNSEQIITASKDGTIRVWNINVRYHLDEDPKTLRVLPIPLHDSKGSVC
QYDHMSVSPDEKVLATTSGSTLQWLCVETGAVLDTAEKAHEGDITGIAWAPRTIPNGGTP
AFVLATAGVDKKVKLWLAPKAIST
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggcgagtctggtgtccctgcccctcctctcggccatcttcggcgcc
gccatcgccctcctcttcctctccggatacctccgccgcaagcgcgccgccatcgcccat
ctccccccttccgccaccgccgccgccccggaccagcccaagcaagttcgaccatccaac
cagaaccagcctaagaagggacaccagcgatctcaccacgccgtcgataaggacgccgca
aaaaagcaccatcatcttgatgtcaacactttgagggggcatactgattcagtcacagca
cttcatttctccgatgatgcctgcaacctggccaccgtatgtgcggatggagctgtcaga
gtattcagggttgatgatgtctcaagcaagagctttaaaattctgaggatcaacttgccc
gctggggcacatcctacagctattgctttctcacaaggggcatcatcagttgttgtggca
gcgcaagcacttttaggctcatctctctacatgtatgcggatgttggtgctcctccagct
ggcggaaacaaacagcagggcaagctttctccccctgagataaagtgggaacaccgtaag
attcacggcaaggagtcagtgctgaatcttgcggcagctcgtgcaacctatgggactggt
gatggcagcacaatattgatttcttgctctgaagcaactgatatcaaaatttggcatggg
aaaagtggaaaggagttgggaacagtcgacaccaatcaattgaaaaataatatggctgat
atatccccaaatggccgtttcatagctgctgcagcttttacagctgatgtcaaggtgtgg
gagattgtttattcaaaggatagctctgtgaaggaggtcaataaagttatgcaacttaag
ggtcacaaaagcgctgttacttgcctgtgtttcgctctgaattctgagcagattattaca
gcttccaaagatggtacaattcgagtatggaacattaatgtaaggtaccatcttgatgaa
gaccctaaaaccttgagagttttgccaattcctctccatgattcaaaaggttctgtttgc
cagtatgatcacatgagtgtatctcctgatgagaaagttctggccacgacaagtggatca
acgctgcaatggttatgtgtggaaactggtgcagttcttgatacagctgagaaagcacat
gaaggtgatataactggcattgcctgggctccacgaacaattccaaatggtggaactcct
gcttttgttttagcgactgctggagtggacaaaaaggtgaagctgtggttagctcctaag
gctatttcaacctga
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