Oryza sativa japonica (Japanese rice) (RAPDB): Os03t0161100-00
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Entry
Os03t0161100-00 CDS
T02163
Symbol
Os03g0161100
Name
(RAP-DB) Similar to Viral A-type inclusion protein repeat containing protein, expressed.
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KIP1
Tropomyosin
Motif
Other DBs
RAP-DB:
Os03t0161100-00
LinkDB
All DBs
Position
chr03:join(3260107..3260127,3260707..3261049,3262351..3266753,3267141..3269105,3269268..3270386)
AA seq
2616 aa
AA seq
DB search
MRFLLALVNCPQLEGKFGVLFRLLALRFAWKHDIFCCCLNAYFEEVETSFVVTYDLPRCC
SILSTKDIETDRHIVPLWQLTCSFVPMASLVRHDSNPTQYSWWWVSHISPKNSKWLQENV
TDMDVMVKAMIKLINEDADSFARRAEMYYKKRPELMNLVEEFYRAYRALAERYDQATGAL
RQAHRTISEAFPNQMPSMSEDSPSSGQDVEPRTPEVLMPTRAPFDLDDLQDAAGVSPHLL
TVKRNGTQPDDIGFSSSRKGLKQFSDLFAGSDSSQRVNFSDGKVRKGLNFESPDVKGKKD
DSNDIMNLQHEVSKLLTERQSLKEQISSESQRANKAESEIHSLKDTISCLISEKDTTLLQ
YNESTRRLSVLECEISKAHMELKKLSDDMAMEVDKLKCAESQNSAMQSELETLDQKVRVQ
EQELEQSRKEIESFHLSLQDEMAKRKQAEDALCSLEKQYAQSQKEINRLTLDMEMANDRL
NDFNLVRLNLENTVCELKKEVTSLEVKIQILVQELEQKREEADVMHAQLQDEHSNHMHKE
AALHALENLHSQSQEDFNLVKLNLENTVGELKKEVTSLELKIQIQAQELEQKREEADTVH
AQLQDERSNHMQKEAALHALENLHSQSQEDFNLVKLNLENTVCELKKEVTSLERKIQIQV
QELEQKREEADAMHAQLQDERSNHMQKEAALRALENLHSQSQEEVKQMARDVEHSNKKLS
DLENNNLKLHDLSQGLKKTVAELNSMKDSALLQQQKSSEKVSYLEAQVLVVRSEMEKMVQ
KTQMLDQELEHKNKEISELQNSLQEQVQKCILAETSLLRLEDLHTNSQKEAKTLAHDLER
LSEQLTEVENDRLDLQNISRELKNTISEINSEKDLMLLQQQHSLERQSYLEAQLLDALSE
VEENKKEAQLLEENLAHKNDELNDLQNNLEEEGHKRMHAEAALSMVENLHSKSQEEVGKL
VMDLDKLENELSELQGRNSRMEELSYELQNTISLLNSEKDAALLQQQLSSERACDLMSQL
SKIQLELEKAEEKMQTMEQKLADKNEMVDFLQLSLQDEGKKRVEVETALISSGNLYSQSQ
EDVNRLTLEIERLNEMLNDMENKSSEYKSTILLLNSEKDMSVIQYKQSSLRIYELESKLS
GVQEELDNAEQKVQMLDKELKEKREVVETMQASLQDEAQKRMKGEATLLTMTNLHTQSQE
EVNRLTPEIERLNRKLNEVENVSCELKNTILLLNSERDTTVLQHKQALVRVSDLESELSD
VQAELVNAEKNVQILDKELKQKREEVDSLQASLNEEAQKRIEGEVALLAMENLHSQSQEE
VRGLVLKIETLHGKLNEMENSNRDLKNMICKHSEEIHVLGEQNLSAELTIKGLHDQLEKF
TEMNIGLQNEVGIHVGEKEVLQQDLARQKEDKDILEKHLCSLEHELKAVNIRVATQQHLI
EELQSKNIELEEVCNACDVEKTLLLEKLHGMEELSTEYSILKKSFSNAIVEMEDLKEIVK
ELEASKNSLKYDVSLHATEKDALALELETLGKRCADVLEEKSILETSFSNVNYELQELRV
KYKDSEESSRSYLADNTALLAEKHKLLSQLESTAVSLKFLEDKHADLRDNHGSLLSEKVL
LCNQVKNMQDQLGIKNEQHEALLKLHQMQVNDYEEMVSSLQDKIRHMDQMLEHEQQKCAD
ASISTLILENSLVDARDKNLALFNECQKFIQATDSAEVLIAQLKEEARKEEEDKKALLNR
NEKLRDGISEQIKVLNICKDLGPTDVVHDEIMLQTMSRETFNHVKHKEETEERNVFMDAE
LSVLGAILAQTVIGFRALHQQNCELVEEVESGAAELLFLQKENHKLIELNEQLEQRLQLG
GNREEMLKIEILGLCKELSGLRQSYQTSQSEICNLTKKYDSLLQEYKVLVEKYNALDDEN
AAVIAECIKLDLLSSFFHDLTVESASVLVSLDNDMAMLSSVRHELDHEVTMLNRRAKILE
MDFQHLKCTLENLLEALGSRLVLSEFDSNTSKIICQELTIECNSSMTQLMQKDDKLRKVD
EKVQFLQERNQELCRVLRDLEVAVEDAEGVKVDLEKKITTLTERGAVQDNETRLLREANN
TLQVEVGIHEQKEESLMSTFETMRKEAEQHEREITLLVCDTITRSVNTMVLEEQVLEMMM
EREVLETRFFTEKDMLMKEISSRDAYVDDLQKRVASMRGENAGLMAELAAYLPLVASLSD
QIRALEELEDGTLLLSELNKEGKLEFVQKDRHVPESQDDSSGALKLRSLIARVEALHVVI
LDAKGRRDKEFTESVAQLEAANMEIQELKARKGSNAKEECTEDDRQKYDADNSKGKHVQI
MKDIELDQVSTCALYGTGATIYPLGGDANVELDDEMLQLWETAERDCKNQTAKSSSSEND
IQAVEEVKSEYPSFELARGRDPGIDRLEISAVSLEPQQLWSKNVLDKLASDAQRLSIVQA
SIEEIKQKMVGASKGKSTVSSEYSSIRAQLQEIDGSVLEQIDFNCNVTKKAENYPAFEVS
AELEGYSSRRKISEQVQKGSEKVAKLELELQKIQYVLLKLEEEHEYKRVKAPEKRSRVLL
RDYMTARKDKNDAGQKTKKKRIPFCGCVRIKSRTEP
NT seq
7851 nt
NT seq
+upstream
nt +downstream
nt
atgaggtttcttcttgctctggtaaactgcccacaattggagggtaaatttggtgtgctt
ttcaggctcctagcacttcgttttgcatggaagcatgatatattttgctgttgcttgaat
gcatactttgaagaagtggaaacttcttttgttgttacatatgatttaccacgctgctgc
tcaattctgagcaccaaagacattgagacagacagacacatcgtgcctctgtggcagctt
acttgctcatttgtgccaatggcttctttggtccggcatgattcaaatcccacccagtac
tcatggtggtgggttagccatatcagccccaaaaattccaaatggcttcaagagaacgtt
acagatatggacgtgatggtcaaagcaatgatcaaacttatcaatgaagatgctgactct
tttgcaagaagagcggaaatgtactataagaaacggcctgaacttatgaatcttgtggag
gagttttacagagcataccgtgccttagcagaaaggtacgatcaagctactggtgcactc
cggcaggcccaccggacaatctcagaagcatttccaaatcagatgccgtcaatgtctgaa
gactctccctcctctggccaggatgtggaaccacgtacaccggaagtgttaatgcccacc
cgtgcaccatttgatctggatgatctgcaggatgcagctggtgtatcaccacacctttta
actgtcaagaggaatggtacacagcctgatgacataggtttttcgtctagtcgcaaaggt
cttaagcagttcagtgatttgtttgcaggcagtgacagtagccagcgtgtcaatttttct
gatggaaaagtaaggaaaggtctcaactttgaaagcccagatgttaaaggaaagaaagat
gatagtaatgatatcatgaatttgcaacatgaagtttccaaattattaacagagcgccaa
agtctgaaagagcaaatctcatcagagtctcagagggcaaacaaggctgagagtgaaatc
catagccttaaggacaccatttcatgtttgatttctgagaaagacacaacccttctgcaa
tacaatgaatctacaagaagattgtcagttttagaatgcgagatttctaaggcgcatatg
gaactcaagaaactctctgacgatatggctatggaagttgacaagctaaaatgtgctgaa
tcacaaaacagcgcaatgcagtctgagcttgagactctggatcagaaggtcagggtgcag
gagcaagaacttgaacaaagtagaaaggagatagaaagcttccacttaagtctacaagat
gaaatggccaagcgcaagcaagctgaagatgctctatgctctttagagaaacagtacgct
caatcgcagaaagaaataaataggttgactctagatatggagatggcaaatgatagattg
aatgacttcaatctggtgaggctcaatctggagaacacagtctgtgagctgaagaaggaa
gtcacgagcctagaagtgaagatacaaatactggtgcaggaacttgaacagaagagagaa
gaggctgatgtcatgcatgctcagttgcaagatgaacactccaatcacatgcataaggaa
gcagctcttcatgcattggagaacttgcattcccagtctcaagaagacttcaatctggtg
aagctcaatctggagaacacagttggcgagctgaagaaggaagtcacgagcctagaactg
aagatacagatacaggcgcaagaacttgaacagaagagagaagaagctgataccgtgcat
gctcagttgcaagatgaacgctccaatcacatgcaaaaggaagcagctcttcatgcattg
gagaacttacattcccagtctcaagaagacttcaatctggtgaagctcaatctggagaac
acagtctgtgagctgaagaaggaagtcacgagcctagaacgcaagatacagatacaggtg
caagaacttgaacagaagagagaagaggctgatgccatgcatgctcagttgcaagatgaa
cgctccaatcacatgcaaaaggaagcagctcttcgtgcattggagaacttacattcccag
tctcaagaagaggttaaacagatggctcgagatgttgagcactcgaacaagaagttgagt
gacctggaaaataataacttgaaattgcatgacctgtcacaaggactcaagaagacggtt
gcagagctgaattctatgaaagattctgcacttcttcaacagcagaagtcctcggagaag
gtatcttatttggaagcacaggttttagtagtgcgatcagaaatggagaagatggtacag
aaaactcagatgctggaccaggaacttgaacacaagaacaaagagatcagtgaactccaa
aatagtttgcaagagcaagtccagaagtgcattcttgctgaaacatctctgctcagattg
gaggacctacatactaattcacaaaaagaagctaagacattagcacatgatcttgaaaga
ttaagcgagcagcttactgaggttgaaaatgataggctggatctgcagaacatttcacga
gaacttaagaatactatttcagagattaattctgagaaagacttaatgctacttcaacag
cagcattccttggagagacagtcttacttagaggctcaacttttagatgcactgtcagaa
gtggaggaaaacaagaaggaagcccaattgttggaagaaaaccttgcacataagaatgat
gagttgaatgacctccaaaataatttggaagaggaaggccataaacggatgcatgctgaa
gcagcccttagtatggtggaaaatctgcattccaaatcccaggaagaagtgggtaagcta
gttatggatcttgataaattagaaaatgagctaagtgaattgcaaggcagaaattcgaga
atggaagaattatcatatgagcttcagaacaccatctcccttcttaattctgagaaagac
gcagcacttctacaacagcagctgtcctctgaaagagcatgtgatctgatgtcacagctc
tcaaagatacagttggagctggagaaggctgaggagaagatgcagacaatggagcaaaaa
cttgcagataagaatgaaatggtggattttctgcagttgagtttgcaagatgagggcaag
aaacgtgtggaagttgagacagctctcatttcatcgggtaacttgtactctcaatcacag
gaagatgtgaataggttaaccctggagattgagaggttgaacgaaatgttgaatgatatg
gagaacaagtcttctgagtataagagcaccatcttgcttctgaattctgagaaagacatg
agtgttattcagtacaagcagtcttcactaagaatatatgagctggagtctaaactctca
ggggtgcaggaagaactagataatgctgaacaaaaagtgcaaatgctggataaagaactc
aaggagaagagagaggtggttgaaactatgcaggctagtctgcaggatgaagcccaaaag
cgtatgaagggtgaagcaactcttctcacgatgactaatctgcatacgcagtctcaggaa
gaagtgaataggttgaccccagagattgagaggctgaatagaaagttaaatgaagtggaa
aatgtctcttgtgagcttaagaacaccatactgctgctgaattctgagagagatactact
gttcttcagcacaagcaggccttggtgagagtgtctgatctggaatctgaactctctgat
gtgcaggctgaactagtcaatgctgagaaaaatgtgcaaattctggataaagaactcaaa
cagaaaagagaagaggttgacagcttgcaggcgagcctgaatgaagaagcccagaagcgc
attgagggtgaagtagctcttcttgcaatggaaaatctacattctcagtctcaggaagaa
gtaaggggattggttttgaagattgagacactacatggcaagttgaatgagatggagaac
agtaatagggaccttaagaacatgatatgcaagcattcggaggagatacatgtgcttggt
gagcaaaatctttctgccgagttaactattaaaggtctccatgatcaattggagaagttt
acggaaatgaacataggtcttcagaatgaagtgggaatccacgttggtgagaaggaagtt
cttcaacaagacttggcccgccagaaagaagataaggatattctggagaagcatctctgt
tctttggaacatgagctgaaggcagtaaacataagggtggcaacacaacagcatttaatt
gaggaattgcagagtaagaacattgaattggaggaggtatgcaatgcatgtgatgttgaa
aagacactcctcttggaaaagcttcatggcatggaggagctgtccacagagtattcaatc
ttgaagaaatcattttcaaatgcaattgttgaaatggaagacctgaaggaaattgtaaaa
gaactggaagcttcaaaaaactctctgaaatatgatgtctccttgcatgccactgagaag
gatgctttggcattagaactagagacccttggtaaaagatgtgctgatgttttagaggaa
aaatccattctggaaacttcattctctaatgtgaattatgagcttcaagaattgagagta
aagtataaagattcagaagaatcctctcggtcttatcttgctgacaacactgctcttctt
gctgaaaagcacaaactactctcccagctggaaagcactgcagtgtctttgaaattcctg
gaggataaacatgctgatctgagagataatcatggatctttgttatcagagaaagttctt
ttatgcaaccaagtaaagaatatgcaagatcagttgggaataaaaaatgaacagcatgaa
gcgctgcttaagttgcaccaaatgcaggtaaatgattatgaagagatggtttcttctctg
caagataaaattcgtcatatggatcagatgcttgaacatgagcagcaaaaatgtgcagat
gcttctatcagcacattgatattggaaaatagcttggttgatgcaagagacaaaaatctt
gcactcttcaatgaatgccagaagttcatacaggccactgattctgcagaggtactaatt
gcgcagctcaaggaggaagccagaaaggaagaagaggacaaaaaagcattgctgaatcgc
aatgagaaactaagggatgggatctcagagcaaattaaggtcctcaatatctgtaaagat
ttaggacctactgatgtggttcatgatgaaattatgctgcagactatgtctcgtgaaact
ttcaaccatgtaaaacataaagaggaaaccgaagagagaaatgtcttcatggatgctgag
ctatctgttcttggagcaattctggcacaaacagtaattggcttcagagctctgcaccag
cagaactgtgaacttgtggaagaagtggagtcaggagcagcagaactgctttttctgcaa
aaggaaaatcacaagcttattgaattgaatgaacagttggagcaaagattgcagttaggt
ggcaacagggaggagatgttgaagattgaaatactgggattatgcaaggagctatcaggc
ttgagacagtcctaccagacttctcaaagtgaaatttgcaacctaactaaaaaatacgat
tccttgctgcaggagtacaaagttttagttgagaagtacaatgctttggatgatgagaat
gctgctgttattgcagaatgcataaagctcgacctcctgtcttcattctttcatgacctt
actgttgagtctgcatctgttttggtttctcttgacaatgatatggctatgttgagttcg
gttaggcatgaacttgatcatgaggttaccatgctgaacagaagagctaagattcttgaa
atggactttcagcacctcaagtgcactctagagaacttgttggaggctctggggagtcgc
ttggttctttcagagtttgattcaaacacaagcaaaatcatctgccaggaattaacaatt
gaatgtaacagtagcatgacacagttgatgcagaaagatgataaattacgcaaagtagat
gagaaagttcaattcttgcaagagagaaaccaggaattgtgcagagttctcagggatctt
gaggttgctgtagaagatgcagaaggagtaaaagtagaccttgagaagaaaatcacaaca
ctaactgaacgaggtgctgtacaagacaatgagacccgtcttcttcgcgaagcaaacaac
acgctgcaggtagaggttggcattcatgaacaaaaggaagagagtttgatgtctacattt
gagacgatgagaaaagaggctgaacagcatgaaagggaaattactttgctggtatgtgat
acgataactcgttcagtgaatacaatggtccttgaggaacaagtgcttgaaatgatgatg
gagcgtgaggtccttgagacaagattttttactgaaaaggacatgctaatgaaggaaatc
tcctcaagagatgcttatgttgatgacttgcagaaaagggtcgccagcatgaggggagaa
aatgcaggactgatggcagagttggccgcatatctgccacttgtagcatctttgtctgat
cagataagagcgctggaagagctagaagacggcacacttttactgtcagaacttaataaa
gaaggcaaattggaatttgtgcaaaaggacagacatgttccagaatcccaagatgattca
tcaggagctttgaagttgcgaagcttaattgcaagagttgaagcactccatgttgtaata
ctggatgccaaaggccgccgagataaggagtttactgaatctgttgctcaactggaagcg
gcaaatatggaaattcaagagcttaaagcaagaaaaggctcgaatgctaaggaagaatgc
accgaggatgataggcaaaagtatgatgctgataactccaaagggaaacatgtacagatc
atgaaagacatcgaacttgatcaagtatctacttgtgcactatatggtactggtgccacc
atctaccctcttggtggcgatgcaaatgtggagcttgacgatgagatgcttcaactgtgg
gagactgctgagagggattgcaagaaccaaacagctaaatcttcatcgtctgagaatgac
atacaagcagtggaggaggtgaagagtgagtacccttcgtttgaactagcaaggggaaga
gatccaggaattgacaggcttgagatatcagcagtgtccctggaacctcagcaattgtgg
agcaaaaatgtccttgataaactagcttctgatgctcagaggctgtctattgtccaagcc
agcattgaagaaataaagcagaaaatggtgggtgcttctaagggaaaatctaccgtaagc
tctgaatacagcagcatcagagctcagctgcaggagattgatggctctgtcttggagcag
atagatttcaactgtaatgtgacaaagaaggctgagaattaccctgcatttgaggtgagt
gctgaactagaaggctattccagcagaagaaaaatctcagagcaagtgcagaaaggatca
gaaaaggtcgcaaagttggaattggaacttcagaagatacagtatgtcttgttgaagctt
gaagaggagcatgagtacaaaagagttaaagcccctgagaaacgttcacgcgttcttttg
agggattatatgactgcaaggaaggacaaaaatgatgccggacagaagacgaagaagaag
aggatacccttctgtggttgtgtccgtattaaatcaagaactgagccttaa
DBGET
integrated database retrieval system
