Oryza sativa japonica (Japanese rice) (RAPDB): Os03t0174900-01
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Entry
Os03t0174900-01 CDS
T02163
Symbol
Os03g0174900
Name
(RAP-DB) Similar to RAPB protein.
KO
K08064
nuclear transcription factor Y, alpha
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dosa03000
]
Os03t0174900-01 (Os03g0174900)
Transcription factors [BR:
dosa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
Os03t0174900-01 (Os03g0174900)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CBFB_NFYA
DUF5547
Motif
Other DBs
RAP-DB:
Os03t0174900-01
LinkDB
All DBs
Position
chr03:complement(join(4003529..4003711,4003371..4003439,4002754..4002924,4002371..4002577))
AA seq
209 aa
AA seq
DB search
MQSLFASTLLKLCDISFLLVLMLGNLDGYTKSDEGKMMSALSLGKSETVYAHSEPDRSQP
FGISYPYADSFYGGAVATYGTHAIMHPQIVGVMSSSRVPLPIEPATEEPIYVNAKQYHAI
LRRRQLRAKLEAENKLVKNRKPYLHESRHQHAMKRARGTGGRFLNTKQQPEASDGGTPRL
VSANGVVFSKHEHSLSSSDLHHRRAKEGA
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtttgtttgcatctacactactgaagttatgtgacatttcttttcttcttgta
ctaatgctaggtaatcttgatggttacacgaagagtgatgaaggtaagatgatgtcagct
ttatctctgggcaaatcagaaactgtgtatgcacattcggaacctgaccgtagccaaccc
tttggcatatcatatccatatgctgattcgttctatggtggtgctgtagcgacttatggc
acacatgctattatgcatccccagattgtgggcgtgatgtcatcctcccgagtcccgcta
ccaatagaaccagccaccgaagagcctatttatgtaaatgcaaagcaataccatgcgatt
ctccgaaggagacagctccgtgcaaagttagaggctgaaaacaagctggtgaaaaaccgc
aagccgtacctccatgaatcccggcatcaacacgcgatgaagagagctcggggaacaggg
gggagattcctcaacacaaagcagcagcctgaagcttcagatggtggcaccccaaggctc
gtctctgcaaacggcgttgtgttctcaaagcacgagcacagcttgtcgtccagtgatctc
catcatcgtcgtgcgaaagagggcgcttga
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integrated database retrieval system
