Oryza sativa japonica (Japanese rice) (RAPDB): Os03t0411100-01
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Entry
Os03t0411100-01 CDS
T02163
Symbol
Os03g0411100
Name
(RAP-DB) Similar to Nuclear Y/CCAAT-box binding factor A subunit NF-YA.
KO
K08064
nuclear transcription factor Y, alpha
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dosa03000
]
Os03t0411100-01 (Os03g0411100)
Transcription factors [BR:
dosa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
Os03t0411100-01 (Os03g0411100)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CBFB_NFYA
SUIM_assoc
LCE
Motif
Other DBs
RAP-DB:
Os03t0411100-01
LinkDB
All DBs
Position
chr03:join(16966930..16966992,16967081..16967234,16968868..16968998,16969076..16969150,16969431..16969598,16969953..16970315)
AA seq
317 aa
AA seq
DB search
MIMLLQEMENHPVQCMAKTNYDFLARNNYPMKQLVQRNSDGDSSPTKSGESHQEASAVSD
SSLNGQHTSPQSVFVPSDINNNDSCGERDHGTKSVLSLGNTEAAFPPSKFDYNQPFACVS
YPYGTDPYYGGVLTGYTSHAFVHPQITGAANSRMPLPVDPSVEEPIFVNAKQYNAILRRR
QTRAKLEAQNKAVKGRKPYLHESRHHHAMKRARGSGGRFLTKKELLEQQQQQQQQKPPPA
SAQSPTGRARTSGGAVVLGKNLCPENSTSCSPSTPTGSEISSISFGGGMLAHQEHISFAS
ADRHPTMNQNHRVPVMR
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgataatgctgttgcaagaaatggagaatcatcctgtccaatgcatggccaagaccaac
tatgattttcttgccaggaataactatccaatgaaacagttagttcagaggaactctgat
ggtgactcgtcaccaacaaagtctggggagtctcaccaagaagcatctgcagtaagtgac
agcagtctcaacggacaacacacctcaccacaatcagtgtttgtcccctcagatattaac
aacaatgatagttgtggggagcgggaccatggcactaagtcggtattgtctttggggaac
acagaagctgcctttcctccttcaaagttcgattacaaccagccttttgcatgtgtttct
tatccatatggtactgatccatattatggtggagtattaacaggatacacttcacatgca
tttgttcatcctcaaattactggtgctgcaaactctaggatgccattgcctgttgatcct
tctgtagaagagcccatatttgtcaatgcaaagcaatacaatgcgatccttagaagaagg
caaacgcgtgcaaaattggaggcccaaaataaggcggtgaaaggtcggaagccttacctc
catgaatctcgacatcatcatgctatgaagcgagcccgtggatcaggtggtcggttcctt
accaaaaaggagctgctggaacagcagcagcagcagcagcagcagaagccaccaccggca
tcagctcagtctccaacaggtagagccagaacgagcggcggtgccgttgtccttggcaag
aacctgtgcccagagaacagcacatcctgctcgccatcgacaccgacaggctccgagatc
tccagcatctcatttgggggcggcatgctggctcaccaagagcacatcagcttcgcatcc
gctgatcgccaccccacaatgaaccagaaccaccgtgtccccgtcatgaggtga
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