Oryza sativa japonica (Japanese rice) (RAPDB): Os03t0647600-01
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Entry
Os03t0647600-01 CDS
T02163
Symbol
Os03g0647600
Name
(RAP-DB) Similar to Nf-Y-A subunit.
KO
K08064
nuclear transcription factor Y, alpha
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dosa03000
]
Os03t0647600-01 (Os03g0647600)
Transcription factors [BR:
dosa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
Os03t0647600-01 (Os03g0647600)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CBFB_NFYA
Motif
Other DBs
RAP-DB:
Os03t0647600-01
LinkDB
All DBs
Position
chr03:complement(join(25073379..25073667,25071539..25071657,25071301..25071369,25070759..25070902,25069604..25070047))
AA seq
354 aa
AA seq
DB search
MLSFKQSHEGFGHVAAAGAGPQQQQQPWWAGSQLLYGEASPEEAALRDGGQFQVVPGGRA
ALDPAAPEPEKTAVPAMPKRGGGGGAPEVLKFSVFSGNLEPGDTGEKNREHSATIAMQSP
LPEYNGHFELGLGQSMVSPNYPCIDQCYGLMTTYAMKSMSGGRMLLPLNAPADAPIYVNA
KQYEGILRRRRARAKAQRENRLVKGRKPYLHESRHRHAMRRARGSGGRFLNTKKEATAAG
CGGSSKTPLASLVSPADVAHRPGSGGRASSLSGSDVSSPGGVMYDHHRHDDADAADHYNS
IDHHLRTPFFTPLPIIMDSGGGGGDHASHSAAAVAAPFRWATAAGDGCCELLKA
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcttcaagcagagccacgaggggttcggccatgtcgccgccgctggagctgga
ccgcagcagcagcagcagccgtggtgggcggggtcgcagctgctgtacggggaggcgtcg
ccggaggaggcggcgctgcgcgacggcggccagttccaggtcgtgcccggaggccgcgcc
gcgctggatccggcggcgccggagccggagaagacggcggtgccggcgatgcccaagaga
ggaggaggaggaggggctcctgaggtgctgaaattctcggtgttttcaggtaatttggag
ccgggagatacaggagagaagaacagagagcactctgccactattgcaatgcaatcgccg
ttgccagaatacaacggccatttcgagcttggtcttggtcaatccatggtctctcccaat
tatccttgtattgaccaatgctatggtcttatgaccacctacgcgatgaaatcaatgagt
ggcgggcgaatgctactgccgctgaacgcgccagccgatgcgccgatctatgtcaacgcg
aagcagtacgaaggcatcctccgccgtcgccgtgcccgcgccaaggcccagagggagaac
aggctggtcaaaggcaggaagccctacctccacgagtcgcgccaccgccacgccatgcgc
cgggccagaggctccggcggccgcttcctcaacaccaagaaagaagccaccgccgccgga
tgcggcggcagcagcaagacgcccctcgcgtccctcgtcagccccgccgacgtagcccat
cgtccaggctccggcggccgcgcgtccagcctctccggctccgacgtgtcgtcgccggga
ggcgtcatgtacgaccaccaccgccacgacgacgccgacgcggcggaccactacaacagc
atcgaccaccacctccgcacgccgttcttcaccccgctcccgatcatcatggacagcggc
ggcggcggcggcgaccacgcctcacactccgccgccgccgtcgccgcccccttcaggtgg
gcgacggcggccggcgacggctgctgcgagctcctcaaggcgtga
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