KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os04g0117600
Entry
Os04g0117600      CDS       T02163                                 
Name
(GenBank) Dihydrouridine synthase, DuS family protein
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dosa03016]
    Os04g0117600
Enzymes [BR:dosa01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     Os04g0117600
Transfer RNA biogenesis [BR:dosa03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    Os04g0117600
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH_4 zf-CCCH zf_CCCH_4 DEAD_2 zf-CCCH_2 zf-CCCH_PARP12 zf-CCCH_PAN3
Other DBs
NCBI-ProteinID: BAF13967
RAP-DB: Os04g0117600
UniProt: Q7XT07
LinkDB
Position
4
AA seq 685 aa
MAATAAAAAAAPPADPPDSSPAASSPPRPSPEELVARAVAPVKPAFLRPPLSATPPKDEG
KANGGGAVVAEKKSKRQLKRERKQEQKSSSHLCIEVGKSGNVSSCKYGDSCRFSHDIDAY
LAQKPADLEGTCPFTNLDQLCPYGLTCRFLGTHKDIHAASGNLSEKHEINALNKDIQKLL
WKNKYKFPKASAQIKLLGLKEVIKSKPDAANDDKKVNHDNLDGNDDENKEPLCNPPVNAE
CDSTLCEELDRSEGEPLIDNSIPCVEPRPTKKSKVESDEIDKHGAGTLNTNTESEDPNLS
NGLEPSNNSSSCRTDLITTPHLREKKIIDFREKLYLAPLTTVGNLPFRRLCKTLGADITC
GEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGAYPDTVARTVELVDNECSVDFIDIN
MGCPIDIVVNKGAGSSLLTKPMRIKSIVQAASTVTEKPLTVKVRTAFFEGRNRADSIVSD
IYDWGASAITVHGRSRQQRYSKLADWDYIYQCAQKAPDQLHVVGNGDVFSFTDWNKHVSG
CSKISTSMIARGALIKPWIFTEVKEQRHWDITSGERFNILKDFVSFGLEHWGSDSKGVET
TRYFLLEWLSYTCRYIPVGLLDVIPQRLNWRPPSYCGRDDLETLMISDSAADWIRISEML
LGKVPEGFTFTPKHKSNAYDRAENG
NT seq 2058 nt   +upstreamnt  +downstreamnt
atggccgccaccgccgccgccgccgccgcggcgcctcccgccgacccgccggactcctcc
ccggccgcttcctcccctccgaggcccagcccggaggagctggtcgcccgtgcagtggcc
cccgtcaagcccgccttcctccgcccgcccctgtccgcgacgccccccaaggatgagggc
aaggccaacggcggcggcgcggtggtcgcggagaagaagtccaagcgccagctcaagcgc
gagcgcaagcaggaacagaaatcttcatcacatctttgtatcgaagtagggaaaagtgga
aatgtgagctcttgcaaatatggtgattcttgccgtttcagccatgacatagatgcctat
ttggctcagaaaccagctgaccttgagggcacgtgcccatttaccaatctggaccagttg
tgtccatatggactaacttgtcgatttttgggtacacataaggacatccatgcagcttct
ggaaatctttcagagaaacatgagataaatgctttaaacaaagacattcaaaagctctta
tggaagaacaaatataagttccccaaggccagtgcacagatcaagcttcttggtcttaag
gaagtcattaagagcaaaccggatgctgcaaatgatgataagaaggttaatcatgataat
ctagacgggaatgatgatgaaaataaagaacctctttgcaatcctcctgtaaatgcggaa
tgtgattctactttgtgtgaagaattggatagatcagagggagaacctttgattgataac
tcaattccatgtgttgaaccaaggccaacaaagaagtcaaaggttgaaagtgatgaaatt
gacaaacatggagcgggtactctcaacactaacacagaatctgaagatcctaatttgagt
aatggattggaaccctcaaataactcaagttcttgtagaactgacctaatcacaacacct
catttacgtgaaaagaagataatagattttcgggagaagttgtaccttgctcccttgact
actgtcgggaatctgccttttcggagactctgcaaaaccttgggagctgatattacttgt
ggagaaatggccatgtgcacaaatcttttacagggacaagcttcagagtgggctttgctg
cgacggcattcatcagaggatttgtttggggtgcaaatttgtggagcctatccagataca
gtagcacgaaccgttgaacttgtggataacgaatgttcagttgatttcatagacataaat
atggggtgcccaattgatattgttgtcaacaaaggtgctggatcatcattgctaacaaaa
cctatgaggatcaaaagtattgtacaagcagcatccactgttactgaaaaacctttaact
gttaaggtaagaactgctttctttgagggaaggaaccgtgctgattctatagtttccgac
atctatgactggggtgcgtcagccataacagtacatggtcgatcccggcaacagcgctac
agcaaacttgctgattgggattatatttaccagtgtgcccagaaagcccctgaccagttg
catgtcgttggaaatggtgatgtattctcttttactgactggaacaaacatgtttcaggc
tgctctaaaatatcgacaagcatgattgctcgaggtgcactcataaagccttggatattt
actgaggttaaagaacaaaggcactgggatattacatctggcgagagattcaatattctt
aaagattttgtgagttttggtctggaacactggggttccgattccaaaggtgttgaaaca
acacgctattttttactagaatggctaagctacacctgccgctacataccggttggcctg
ttggatgtgatcccgcaacgtttgaactggaggcccccaagctactgtggccgtgatgat
cttgaaaccctaatgatctctgattcagcagctgactggatcaggatctcagagatgttg
cttggcaaagttccagaagggtttacgtttacacccaagcacaaatccaatgcttatgat
cgagctgaaaacggctaa

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