Oryza sativa japonica (Japanese rice) (RAPDB): Os04g0118900
Help
Entry
Os04g0118900 CDS
T02163
Name
(GenBank) Similar to Arginine/serine-rich splicing factor 1 variant 2
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Os04g0118900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dosa03041
]
Os04g0118900
Spliceosome [BR:
dosa03041
]
Common components
Common spliceosomal components
SR proteins
Os04g0118900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
SET_assoc
RNA_bind
Motif
Other DBs
NCBI-ProteinID:
BAF13975
RAP-DB:
Os04g0118900
UniProt:
B9FD42
LinkDB
All DBs
Position
4
Genome browser
AA seq
245 aa
AA seq
DB search
MRPVFVGNLDYDTRHSELDRLFYRYGRIDRIDMKSGFAFVYFEDERDGDEAIRALDGYPF
GPGRRRLSVEWSRGDRGSRRDGYSKPPVNTKPTKTLFVINFDPINTRVTDIERHFEPFGK
LSNVRIRRNFAFVQFETQEEATKALEATHSTKLLDRVISVEYAFRDDTERGDRYDGARGG
YGRRDDSPYRRSVSPVYRSRPSPDYGRQRSPVYGSYDRSPVNDRYRSRSPVRRSRSPLAN
RRAYD
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaggcccgtgttcgtggggaacctcgactacgacacccgccactccgagctcgaccgc
ctcttctaccgctacggcaggatcgaccgcatcgacatgaagtcaggatttgcttttgtc
tactttgaggatgagcgtgatggtgatgaggccatacgagcccttgatggctatcctttt
ggccctgggaggcgcaggctttcggtggagtggtcacggggtgatcgtggttccaggcgt
gatggctatagcaaaccacctgtgaatactaaacccacgaagacactatttgtcattaac
tttgaccccatcaacaccagagtcactgatatcgaaaggcatttcgaaccatttggaaag
ctttcgaatgttcggatcaggaggaactttgcttttgtgcagtttgaaacacaggaagag
gccacaaaagcacttgaagctactcattctaccaagttgttggacagggtgatttctgtt
gagtatgccttcagggatgatacagaacgaggtgacaggtatgatggtgcaagaggtggc
tatggtaggcgagatgatagtccatatcgtcgatcagttagtccagtgtacaggtcacgc
ccaagtcctgactacggtcgtcaaaggagtcctgtgtacggttcgtatgacaggagtcct
gttaatgatcgctatcgaagccgatctcctgtccggcgatcaagatccccacttgccaac
agaagagcttatgattga
DBGET
integrated database retrieval system
