Oryza sativa japonica (Japanese rice) (RAPDB): Os04g0382100
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Entry
Os04g0382100 CDS
T02163
Name
(GenBank) SWIB/MDM2 domain containing protein
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
Os04g0382100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dosa03021
]
Os04g0382100
03036 Chromosome and associated proteins [BR:
dosa03036
]
Os04g0382100
Transcription machinery [BR:
dosa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
Os04g0382100
Chromosome and associated proteins [BR:
dosa03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
Os04g0382100
PBAF complex
Os04g0382100
GBAF(ncBAF) complex
Os04g0382100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
YEATS
SWIB_eIF2D
Motif
Other DBs
NCBI-ProteinID:
BAF14519
RAP-DB:
Os04g0382100
UniProt:
A0A0P0W9B3
LinkDB
All DBs
Position
4
Genome browser
AA seq
346 aa
AA seq
DB search
PPALQRTLRIYVFNTFANQAPRTIPPPKNAEPPTWSLKIIGRVLEDGAELDPASVVPKHN
PVYPKFSSFFKRVTIALDPSLYPENPLIIWENARSAAPQEGFEVKRKGDKEFSANIRLEM
NYNPEKFKLSQPLMEVLGVEVDTRSRVIAALWQYIKAKKLQNPTDPSFFMCDPQLKKVFG
EDKLRFAMLSQKISQHLSPPPPINLEHKIKLSGNGAHASACYDVIVDVPFPLQKEMSAFL
ANTEKHKDIEACDEVISASIKKIHEHRRRRAFFLGFSQSPVEFINALIASQSKDLKLIAG
EANRNIERERRADFYNQPWVEDAVIRYLNRKPASGNEGPGGGAGGS
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
ccccccgcgctgcagcgcacgctccgcatctacgtgttcaacaccttcgccaaccaggcg
ccgcgcaccatcccgccgcccaagaacgccgagccgcccacctggtcgctcaagatcatc
ggccgcgtgctcgaggacggcgccgagctggaccccgccagcgtcgtgcccaagcacaac
cctgtgtaccccaagttctcgtccttcttcaagagggtgacgattgcgctcgacccgtcg
ctgtacccggagaacccgctgatcatttgggagaatgcgcggtcggccgccccacaggaa
gggttcgaggtgaagaggaaaggggataaggagttctccgcgaatatccggctggagatg
aactataaccctgagaagttcaagctctcgcagcctctgatggaggtgctcggggttgag
gtggacactcgttcgagggtgattgctgccctctggcagtacatcaaagcgaagaagctg
cagaatccaaccgatccttcgttctttatgtgtgatccacagttgaagaaggtctttggg
gaggataagctgaggtttgcgatgctatcgcagaagatatcacagcatctctctcctccg
ccgcccatcaacttggagcataagattaagctctctgggaatggcgcgcatgcgagtgct
tgctatgatgtgattgtggatgttcctttccctctgcagaaggagatgtctgcatttctt
gccaacactgagaagcacaaggacattgaggcatgtgatgaggtgatatctgcttcgatc
aagaagatccatgagcaccgcaggaggagggcattcttccttggtttcagccagtcccca
gtggagttcatcaatgcactgatagcgtctcagagtaaagatttgaagctgatcgcagga
gaagcaaataggaatattgaaagagaaagacgtgcagacttctataatcaaccatgggtt
gaggatgctgtcataagatacctgaaccgcaaaccggctagcggtaatgagggcccaggc
ggtggtgctggtggttcatga
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