Oryza sativa japonica (Japanese rice) (RAPDB): Os04g0395600
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Entry
Os04g0395600 CDS
T02163
Name
(GenBank) Similar to TRANSPORT INHIBITOR RESPONSE 1 protein (F-box/LRR-repeat protein 1)
KO
K27740
protein auxin signaling F-box 2/3
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
Os04g0395600
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
DUF7885
F-box-like
LRR_6
LRR_4
F-box
Motif
Other DBs
NCBI-ProteinID:
BAF14573
RAP-DB:
Os04g0395600
UniProt:
Q7XVM8
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Position
4
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AA seq
575 aa
AA seq
DB search
MTYFPEEVVEHIFSFLPAQRDRNTVSLVCKVWYEIERLSRRGVFVGNCYAVRAGRVAARF
PNVRALTVKGKPHFADFNLVPPDWGGYAGPWIEAAARGCHGLEELRMKRMVVSDESLELL
ARSFPRFRALVLISCEGFSTDGLAAVASHCKLLRELDLQENEVEDRGPRWLSCFPDSCTS
LVSLNFACIKGEVNAGSLERLVSRSPNLRSLRLNRSVSVDTLAKILLRTPNLEDLGTGNL
TDDFQTESYFKLTSALEKCKMLRSLSGFWDASPVCLSFIYPLCAQLTGLNLSYAPTLDAS
DLTKMISRCVKLQRLWVLDCISDKGLQVVASSCKDLQELRVFPSDFYVAGYSAVTEEGLV
AVSLGCPKLNSLLYFCHQMTNAALVTVAKNCPNFTRFRLCILEPGKPDVVTSQPLDEGFG
AIVRECKGLQRLSISGLLTDKVFMYIGKYAKQLEMLSIAFAGDSDKGMMHVMNGCKNLRK
LEIRDSPFGDAALLGNFARYETMRSLWMSSCNVTLKGCQVLASKMPMLNVEVINERDGSN
EMEENHGDLPKVEKLYVYRTTAGARDDAPNFVKIL
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgacgtacttcccggaggaggtggtggagcacatcttcagcttcctgccggcgcagcgc
gaccgcaacacggtctcgctcgtctgcaaggtgtggtacgagatcgagaggctgagccgc
cgcggcgtcttcgtgggcaactgctacgccgtgcgcgccggccgcgtcgccgcgcggttc
cccaacgtgcgggcgctcacggtgaaggggaagccccacttcgccgacttcaacctcgtg
ccccccgactggggcggctacgcggggccgtggatcgaggcggccgcgaggggatgccac
ggcctggaggagctcaggatgaagcggatggtggtgtccgacgagagcctcgagctgctg
gctcgctcgttcccgcggttcagggctcttgttcttatcagctgcgaggggttcagcact
gacgggctagccgccgtcgcgagccattgcaagcttctgagggagttggatttgcaggaa
aatgaagtggaggatcgagggcctaggtggctttcctgcttccctgattcctgcacatca
cttgtctcattgaattttgcctgcatcaaaggggaggttaatgctggttcactggagaga
cttgttagcaggtccccaaacctgcggagtttgaggctgaatcgatctgtatcggtagat
acacttgcaaagatactactgcgtacccctaacttggaggatttggggacagggaatttg
acagatgacttccaaactgagtcctactttaagcttaccagtgctctggagaaatgcaag
atgttgaggagtttgtctggattctgggatgcttctcctgtttgcctgtcatttatctac
cccctgtgtgctcaactgacaggattgaacttgagctatgcccccacacttgatgcttct
gaccttacaaaaatgattagccgctgtgtgaagctccaacgcctttgggtactggattgt
atctcggacaaaggcttgcaagtggtggcctccagttgcaaagacttgcaagaactcagg
gtatttccatcagatttctacgtagctggttattctgcagtgacagaggagggacttgtt
gcagtatccttgggctgtccaaaactgaactcactactgtacttctgtcaccaaatgact
aatgctgcactagttactgtcgccaagaactgtccaaatttcacacgattcagactttgt
attcttgagccagggaagcctgatgttgtgacaagccaaccattagatgaaggctttgga
gctattgttcgtgagtgcaagggattacaacgtttgtcaatatctggtcttctcacagac
aaagttttcatgtatattgggaaatatgcaaaacaacttgagatgctttctatagcattt
gctggtgacagtgataagggtatgatgcatgttatgaatggatgcaagaatttaaggaaa
ctggagataagagatagcccgtttggtgatgctgcactcttggggaattttgctaggtac
gagacaatgcgatccctttggatgtcatcttgcaatgtcacgttaaaggggtgccaagtc
cttgcgtcaaagatgccgatgctcaatgttgaggtcataaatgagcgggatggtagcaat
gaaatggaggaaaaccatggagatctgcctaaagtggagaaattatatgtgtaccgcaca
actgctggggcgagggatgatgcaccaaattttgttaaaatcctatag
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