Oryza sativa japonica (Japanese rice) (RAPDB): Os04g0530400
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Entry
Os04g0530400 CDS
T02163
Name
(GenBank) contains InterPro domain(s): IPR010989
KO
K08492
syntaxin 18
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04130
SNARE interactions in vesicular transport
dosa04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
Os04g0530400
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
Os04g0530400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dosa04131
]
Os04g0530400
Membrane trafficking [BR:
dosa04131
]
SNARE
Syntaxin (Qa)
Stx-rER
Os04g0530400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
SNARE
DUF6331
Motif
Other DBs
NCBI-ProteinID:
BAF15303
RAP-DB:
Os04g0530400
UniProt:
A0A0P0WCV2
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Position
4
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AA seq
316 aa
AA seq
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MSRVRDRTEDFKESVRVAALGHGYTESQLAVLMSSFIIRKPAPKLPFTKAAIKTLESIRE
LEKFIVKHRKDYVDLHRTTEQERDNIEHEVSVFVKACKEQIDILKNRIHEEKGGSTKTWL
GTSDESSRLDLIAHQHGVVLILSERLHSVTVQFDRLRTMRFQDAINRAMPRKRIQKKRET
KAAEPSKPNLVLKSDVSKVEDQEVSTAPLRVQEQLLDDETRALQVELTNLLDAVQETETK
MIEMSALNHLMSTHVLQQAQQIQYLYDQAVEATNNVERGNKELSQAIQRNSSSRTFLLLF
FFVLTFSVLFLDWYSK
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagggttcgcgacaggaccgaggacttcaaggagtccgtccgcgtcgccgcgctc
ggccatgggtacacggagtctcagttagccgtgctcatgtcttccttcatcatccggaag
ccggcccccaaattaccctttacaaaggctgcaatcaagacgcttgagagtatcagggaa
ctggagaagtttattgtgaagcataggaaggactatgttgacttgcatcgcaccacggag
caagaaagggacaacattgagcatgaggtcagtgtttttgtaaaagcatgcaaggaacaa
atagatatcctaaagaacaggatccatgaagaaaaaggtggaagtacaaagacatggctt
ggtacaagcgatgagagctcccggttggatttgatagctcaccagcatggcgtggttttg
attttgagtgagcgtcttcactcagtaactgtgcaatttgatcgtcttcggaccatgcgt
tttcaagatgctattaacagagcgatgccaagaaaacggattcagaagaaacgagaaacc
aaagctgctgaaccatctaagccaaaccttgtattaaaatctgatgtttcaaaggttgaa
gatcaggaggtctctactgcaccactaagagttcaagaacaactcttggatgatgaaaca
agagctcttcaggtggagttgacaaatcttcttgatgctgtccaagaaacagagacaaag
atgatagagatgtcagcacttaatcatctcatgtcaacacatgttctacaacaagctcag
cagatccagtatttatatgaccaggcagttgaagctacaaacaatgtggagcgtgggaac
aaggagctatcccaggcgatccagcgcaacagcagcagtagaaccttcctcctacttttc
ttctttgttcttaccttttccgttctctttctggattggtacagcaaatga
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