Oryza sativa japonica (Japanese rice) (RAPDB): Os04g0538700
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Entry
Os04g0538700 CDS
T02163
Name
(GenBank) Conserved hypothetical protein
KO
K08331
autophagy-related protein 13
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
Os04g0538700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dosa04131
]
Os04g0538700
03029 Mitochondrial biogenesis [BR:
dosa03029
]
Os04g0538700
Membrane trafficking [BR:
dosa04131
]
Autophagy
Autophagosome formation proteins
ULK complex
Os04g0538700
Atg1 complex
Os04g0538700
Mitochondrial biogenesis [BR:
dosa03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
Os04g0538700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-ProteinID:
BAF15346
RAP-DB:
Os04g0538700
UniProt:
A0A5S6R9W9
LinkDB
All DBs
Position
4
Genome browser
AA seq
520 aa
AA seq
DB search
MSSMSDSGTGGRGGAELMVEQFHLKVLHAVLAVRGPRPLQPAASASFRRRDRWFHLPLHD
PQPPPAAEGVEAPEAGEPLVVDILLAHAAAGGGGGGGAGGEVVERWTVVCEPWPDAAAGE
GIPVNRAYKRCMTMLRSVYATLRFLPAYRVFRLLCANQSYNYEMVHRVGSFAVPLSRDEE
AAMRSYQFVPVETQHGRLVVSVQYLPSLAAFNLEISSLSPSMLIADYVGSPAAEPMRAFP
ASLTGATGSAFPQALSNQPQRPHSWATPALWPQAPRQQARFSPPHLLNASPTPSPPNFPS
GYLQSRPKGGSAPMSIPQVGDRRSPIHRPITLPPTSPRRVGETGTSSAQQSPSERCPSFG
RADGFRIMDPYASLSPGRKGKDTKDESGRFSALSSCDSPRQDDIDDADYPFAVDDVDTPS
SQPGSSDGKEARDQASSSSHKSQDAAVGSLVHLLKTARPLRNSNCPSQASAVESSEAAST
SSVVSRRKSDALEELQSFKEIKERLMSRSRAKQQEPPEKP
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcatgtcggactcggggacgggcggccgcgggggcgcggagctgatggtggag
cagttccacctcaaggtgctccatgccgtgctcgccgtgcgcgggccgcgcccgctgcag
ccggccgcgtcggcgtcgttcaggcggcgggacaggtggttccacctcccgctccacgat
ccgcagcctccgcccgcggcggagggagtggaggcgccggaggcgggggagccgctcgtg
gtggacatcctcctggctcacgccgcagccggcggcggcggcggcggcggagcgggcggg
gaggtggtggagagatggacggtggtgtgcgagccctggccggacgccgcggcgggcgag
gggatacccgtgaaccgggcgtacaagcgctgcatgacgatgcttcggtcggtgtacgcc
acgctccgcttcctgccggcgtaccgcgtcttccgcctcctctgcgccaaccaatcctac
aactacgagatggtccaccgcgtcggctccttcgccgtgccgctctcccgcgacgaggag
gccgccatgcgctcctaccagttcgtccccgtcgagacgcagcacggccgcctcgtcgtc
tctgtccagtacctccccagcctcgctgccttcaatctcgagatctcctccttgtcgccc
tccatgctgatcgccgactacgtgggcagccctgctgccgagccaatgcgtgccttccca
gcttcgctcacaggagccacaggttccgctttcccgcaggcgctgtccaatcagccgcag
cgcccgcacagctgggcgacgccagcgctctggccgcaggcgcctaggcagcaagctaga
ttttcgccacctcatttgctcaacgcatcacccactccatcgccacccaattttcccagc
gggtatcttcaatctcgtcctaagggagggtctgcaccaatgagcataccacaggtgggt
gacaggaggagcccaattcaccggccgatcacattgccaccaacgtctccgaggagagta
ggggagacaggaacatctagtgcacaacagtctccatcagagagatgcccctcgtttggg
agggcagatggatttcgaataatggatccctatgcaagcttgtcgccaggacgcaagggc
aaggacactaaggacgaatctggcaggttctctgcactctcctcctgtgattcccctcga
caagatgatatagatgatgcagattatccctttgctgtggatgatgttgatacaccgagc
tcccagcctgggagcagtgatgggaaggaagctagagatcaggcaagttcgtcgtcccat
aaatcacaagatgccgcagttggctctctggtgcacctgctcaaaactgcacgccctctg
cgaaactctaattgtccatctcaagcatcagcggttgaatctagtgaagcagcctcaacc
agttctgtcgtgtcccgtaggaaatctgatgcactcgaagagctccaatcatttaaagaa
atcaaggagaggttgatgtcccggagtagagcaaaacagcaagagccaccagaaaaacca
tag
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integrated database retrieval system
