Oryza sativa japonica (Japanese rice) (RAPDB): Os04g0566100
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Entry
Os04g0566100 CDS
T02163
Name
(GenBank) Similar to Transcriptional activator SRCAP
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dosa03036
]
Os04g0566100
Chromosome and associated proteins [BR:
dosa03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
Os04g0566100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ResIII
DEAD
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
BAH92777
RAP-DB:
Os04g0566100
UniProt:
C7J0V8
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All DBs
Position
4
Genome browser
AA seq
914 aa
AA seq
DB search
MRRGYEEIDDDEWSNHSFKPSRVLKRPSRGAQPDSQPPPPIDSFRYNPRPSSSSAAAAAT
ATVVLSDDDDDFELGEEERLRRAGKSTRVLNRPQRQHSPPGRALPPRESFRYNPKPAKAA
AAVSVSDDDDDGFDLEDDDFDIPSSRTSRPRRTAGRRLATAVADLSEEDDDLELADDDFD
HPDPRPTRPRRATARRFVIKDDDDSDGDVGASEVDGVEAEEDDGVNWSELENEDDEDGDY
GETKVEVEEGDVVGKALRKCARISADLRQELYGSSTRNCESYAEIDDSSVRIVTQVWSFD
SMDVSEQDDVDAACTSEESEFEPILKPYQLVGVNFLLLLHRKNIGGAILADEMGLGKTVQ
AVTYLTLLRHLYNDPGPHLIVCPASVLENWERELKKWCPSFSIIMFHGAGRTAYSKELSS
LGKAGYPPPFNVLLVCYSLFERRSAQQKDDRKALKRWRWSCVLMDEAHVLKDKGSFRWRN
LMAVAQHARQRLMLTGTPLQNDLHELWSLLEFMMPDIFATGDIDLKKLLNAEDHELISRI
KSILGPFILRRLKSDVMQQLVPKIQHVNFVTMDSEQFQAYNYAIDEYRGACQARSAKSTS
NFSNNVVGLIPKRQISNYFMQFRKIANHPLLIRRIYSDKDVDRIAKLLYPKGAFGFECSL
ERATQELRKYNDFAIHQLLVSYGDSGTKGALTDEHVLGSAKCQALAELLPSLANDGHRVL
IFSQWTTMLDILEWTLEVIGVTYRRLDGGWIGKLKIAAIALDNRNLSLSIDCEHITIFIS
TWLVTKGSVDENIYEIARRKLVLDAAILQSGAELEDSTDVPEKTMGEILASLLLLLDDTL
VTCEVLIGFPSKARWNIPIVMLEDFAHDQQNLIACLEDRFVVVYGLSAGPFVALLASVRL
RPDGCSSSCSGLFG
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgaggctacgaggagatcgacgacgacgagtggtcgaaccacagcttcaagcct
tcgcgcgtcctcaagcgaccaagccgaggcgcccagccggactcgcagcctcccccgccc
atcgactccttccgttacaaccccaggccttcctcctcctccgccgccgccgccgccacc
gccaccgtcgtcctctccgacgacgacgacgatttcgaacttggtgaggaggagcggttg
cgccgcgccgggaagagcacccgcgtgctcaatcgtccgcagcggcagcacagcccccct
gggcgggcccttccgccccgcgagtccttccgctacaaccctaaacccgccaaggccgcc
gccgcggtgtcggtttccgatgacgacgacgacggctttgatctcgaagacgatgatttc
gacatcccttcttcgaggacctcgcgtccgcgccgtaccgctggtcggcgcttggcaacc
gccgtcgccgacctctcggaggaagacgacgatttagagctcgctgatgatgattttgac
catccagacccaaggccaacgaggccgcgtcgagccaccgctcgccgtttcgtgattaag
gacgatgatgacagcgacggggatgtgggtgcgtctgaggtggatggggtagaagcagag
gaggatgatggtgtgaactggtcggagttggagaatgaggacgatgaagatggggactat
ggtgagacgaaggtggaggtggaggagggggatgtagtgggtaaggcattgcgcaagtgc
gcgcgcatttcggctgatttgcgacaggagctgtatggctcatcgacaaggaattgtgag
agttatgctgagatagatgattccagtgtccgaattgttacccaggtgtggagttttgat
tcaatggatgtgtcggagcaggatgatgtggatgctgcatgcacaagcgaggagtcggag
tttgagcctattctgaagccctaccagcttgtgggggtcaattttcttcttctcttgcac
cggaaaaatatcggtggagcaattttggctgatgaaatgggtcttggtaagacagttcag
gccgtgacctatcttactctgttgcggcatctatataatgacccaggtccacatctaata
gtttgcccagcttctgtgttggaaaattgggaaagggaacttaaaaaatggtgtccttca
ttttcaatcatcatgtttcatggtgctggaaggactgcctactcaaaggagttgagttca
ttgggcaaagctggttatccgcctccatttaatgtcctccttgtttgttactctctcttt
gagcggcggagtgctcagcaaaaggatgatcgcaaagcactcaaaagatggcgatggagt
tgtgtgttgatggatgaagcacatgtactgaaagataagggtagcttccgatggagaaac
cttatggctgtcgcacaacatgcccgccaacggctaatgctgacaggaactcccctccaa
aatgatttgcatgagctatggtcattgttggagtttatgatgcctgatatatttgccact
ggagatattgatctgaagaagctgttaaatgcagaagatcatgagctaatttcacgtata
aagtccattttggggccatttattcttagacgtttgaaatcagatgttatgcagcaactt
gttccaaagatacaacatgttaatttcgtaacaatggactcagagcagtttcaagcttat
aactatgccattgatgaataccgtggtgcttgtcaagctcgtagcgcaaaatccacatcc
aatttttctaataatgttgttgggttgattccaaaacgacaaatatcaaactatttcatg
cagttccgtaagattgcgaaccatccattgcttataaggcgcatttacagtgacaaagat
gttgatcgaattgcaaagttactgtaccctaaaggtgcattcggttttgaatgttcattg
gaaagagcaacccaagaacttaggaagtacaatgattttgctatccaccaactattagtt
tcctatggtgattctggtacaaagggtgcccttacagatgagcatgttcttggatcagca
aagtgtcaggccttagctgagcttttaccttccttagcaaatgatggccacagagttctc
atattcagccaatggacgacaatgcttgatatccttgaatggacactggaagtaatagga
gttacttatagacgtcttgatgggggatggatcggcaagctgaagatcgctgccatcgca
ttggacaacagaaacctgtcactatctatagattgtgagcatatcaccatattcatatcg
acgtggctagtgacaaagggttcggttgatgaaaacatatatgagatagcaaggagaaag
ttagtattagatgctgcaattctccagtccggagcagagttagaagatagcactgatgta
cctgagaaaacaatgggagaaattttggcatctcttctcctgttgcttgatgatacgctt
gtgacatgtgaggttctgattggatttccgtctaaggcaagatggaacattccaattgta
atgcttgaagatttcgcacatgatcagcaaaatttaatagcttgcttggaagacagattc
gttgtggtttatgggctcagtgctgggccatttgttgctcttcttgcttctgtccgcctt
cgtcctgatggatgttcctctagctgctccggcctgtttggctag
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